Query= MSMg01no106_l08.b1 MSMg01no106_l08.b1 CHROMAT_FILE:
MSMg01no106_l08.b1 PHD_FILE: MSMg01no106_l08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:07:32 2005
(513 letters)
>mm_chr6_48767750_48768661
Length = 912
Score = 961 bits (497), Expect = 0.0
Identities = 509/513 (99%), Gaps = 1/513 (0%)
Strand = Plus / Plus
Query: 1 agagctcactggtgcaccagagcactcttccactctcaccactaggtggcgcgtgcatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagctcactggtgcaccagagcactcttccactctcaccactaggtggcgcgtgcatac 260
Query: 61 taagtgccgttgcccacgttctcggttctctttttgtggctttatggttttgaaagggtt 120
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taagtgt-gttgcccacgttctcggttctctttttgtggctttatggttttgaaagggtt 319
Query: 121 ccaccaaggtttctctgatctgttgtgcttttggttccgtaatttagtagattgcactat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ccaccaaggtttctctgatctgttgtgcttttggttccgtaatttagtagattgcactat 379
Query: 181 agcttataagaactactttccatcaagttaaatttatttgtttgtttgtttgtttattta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 380 agcttataagaactactttccatcaagttaaatttatttgtttgtttgtttgtttgttta 439
Query: 241 ttttacaaaaagtaaagccagggtcttgtgtatcctacctggctgtgaattatgacgctg 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 440 ttttacaaaaagtaaagccagggtcttgtgtatcctacctggctgtgaactatgacgctg 499
Query: 301 agggtggtctagaactccacttccacttcccaggtgctgagattacagacatgcatcatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agggtggtctagaactccacttccacttcccaggtgctgagattacagacatgcatcatc 559
Query: 361 acactgagtttgtgtggtgatgggactgagcatgtatgctaagcaagtgttctaccagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acactgagtttgtgtggtgatgggactgagcatgtatgctaagcaagtgttctaccagcc 619
Query: 421 gagatacctacctccacagccctgaaattttattatactatatctttcttgtttataagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gagatacctacctccacagccctgaaattttattatactatatctttcttgtttataagg 679
Query: 481 aattaatttatcactttcattaattattatgtg 513
|||||||||||||||||||||||||||||||||
Sbjct: 680 aattaatttatcactttcattaattattatgtg 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 912
Length adjustment: 10
Effective length of query: 503
Effective length of database: 902
Effective search space: 453706
Effective search space used: 453706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no106_l08.g1 MSMg01no106_l08.g1 CHROMAT_FILE:
MSMg01no106_l08.g1 PHD_FILE: MSMg01no106_l08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:07:32 2005
(329 letters)
>mm_chr6_48890469_48891197
Length = 729
Score = 598 bits (309), Expect = e-175
Identities = 324/329 (98%)
Strand = Plus / Minus
Query: 1 gcaagtccacacccagaggtatagcttcaaaagtgaagcttggacagacacaggaaatca 60
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gcaagtcaacacccagaggaatagcttcaaaagtgaagcttggacagacacaggaaatca 470
Query: 61 ccaaggagtgtccagcatttcctcctctggttctttggtgctacccacctgccgagattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ccaaggagtgtccagcatttcctcctctggttctttggtgctacccacctgccgagattg 410
Query: 121 cagcctacttcttcctgttgctgatgccagaaagttttgtcagagtccaactcaaaggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 cagcctacttcttcctgttgctgatgccagaaagttttgtcagagtccaactcaaaggtt 350
Query: 181 catttgggtctctgcactcttcactctgtagaaagggatggaggtctagaggccgggcct 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 349 catttgggtctctgcactcttcactctgtagaaaggggtggaggtctagaggccgggcct 290
Query: 241 atgacttggatctgtgagtgggtgaaaggactctgatagtaccttgctgtcataggtaat 300
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 289 atgacttggatctgtgagtgggtgaaaggactctgagaggaccttgctgtcataggtaat 230
Query: 301 aattgtcttgggctccccagattggaagc 329
|||||||||||||||||||||||||||||
Sbjct: 229 aattgtcttgggctccccagattggaagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
