Query= MSMg01no107_d14.b1 MSMg01no107_d14.b1 CHROMAT_FILE:
MSMg01no107_d14.b1 PHD_FILE: MSMg01no107_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:08:48 2005
(327 letters)
>mm_chr6_18986131_18986857
Length = 727
Score = 559 bits (289), Expect = e-164
Identities = 322/347 (92%), Gaps = 24/347 (6%)
Strand = Plus / Plus
Query: 1 ttgatttatttttcttggctttaaaatgggagtttcttttagaagcctgtatttggctct 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 185 ttgatttatttttcttggctttaaaatgggagtttcttttagaagcctgcatttggctct 244
Query: 61 ctgatattatagttcttacttcacaaaccaaacaattggtgct----------------c 104
||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 245 ctgatattatagttcttacttcacaaaccaaacaattggtgcttggtatctctacgtgtc 304
Query: 105 agatatgttcatctcaattatagttttgaggacagggaactttggcattgggtgaatgtg 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 agatatgttcatctcaattatagttttgaggacagggaactttggcattgggtgaatgtg 364
Query: 165 tacagcagggtattgtggtacaagccagactttgattagaaattcattctacctttcttc 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tacagcagggtattgtggtacaagccagactttgattagaaattcattctacctttcttc 424
Query: 225 tgtgtgctcctcttgctctaacccagagttcatgatgacactgtgtatcaat----tttt 280
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 425 tgtgtgctcctcttgctctaacccagagttcatgatgacactgtgtatcaataacattt- 483
Query: 281 tttgaactcttatgttttaaaaataactatgagttctctccctggtc 327
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ---gaactcttatgttttaaaaataactatgagttctctccctggtc 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no107_d14.g1 MSMg01no107_d14.g1 CHROMAT_FILE:
MSMg01no107_d14.g1 PHD_FILE: MSMg01no107_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:08:48 2005
(385 letters)
>mm_chr6_19052115_19052899
Length = 785
Score = 671 bits (347), Expect = 0.0
Identities = 379/403 (94%), Gaps = 21/403 (5%)
Strand = Plus / Minus
Query: 1 ttttttaaattgcatcacttaactcaagagtcacctctacagactagtcacagaaagaca 60
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 675 ttttttaaattgcatcacttaactcaagagtcagctccacagactagtcacagaaagaca 616
Query: 61 aagtctgtattt---------------------ctaccactttcatcctaggaataagct 99
|||||||||||| |||||||||||||||||||||||||||
Sbjct: 615 aagtctgtatttctaagcttacacagtggtgtactaccactttcatcctaggaataagct 556
Query: 100 tgatgtactgtatttctaacgtgttttactatgtaatgtttgttatttgtagtgttttta 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tgatgtactgtatttctaacgtgttttactatgtaatgtttgttatttgtagtgttttta 496
Query: 160 ctatgtatgtatgtaacatttgtaatgttactctatctcattaaatattaagtggtctga 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ctatgtatgtatgtaacatttgtaatgttactctatctcattaaatattaagtggtctga 436
Query: 220 aataagctatccttagtccaaaataattttctgttatataactcactgctcagatttctc 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aataagctatccttagtccaaaataattttctgttatataactcactgctcagatttctc 376
Query: 280 tgaatatttttttgttttcttacctttcactttagtcaactggagtacatcaggtttcta 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tgaatatttttttgttttcttacctttcactttagtcaactggagtacatcaggtttcta 316
Query: 340 acttctgatgataaatggcaggtatgaacttctgcccttgtcc 382
||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 315 acttctgatgataaatggcaggtattaacttctgcccttgtcc 273
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
