Query= MSMg01no108_h12.b1 MSMg01no108_h12.b1 CHROMAT_FILE:
MSMg01no108_h12.b1 PHD_FILE: MSMg01no108_h12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:20 2005
(634 letters)
>mm_chr6_37307304_37308337
Length = 1034
Score = 1033 bits (534), Expect = 0.0
Identities = 595/628 (94%), Gaps = 22/628 (3%)
Strand = Plus / Minus
Query: 4 ggaattctcttttcacatg-aggtccaattcttatccacgtgtttattttccagggctgc 62
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ggaattctcttttcaaatgcaggtccaattcttatccacgtgtttattttccagggctgc 583
Query: 63 aagcctcaggcataacatttctgttcttttcccttcaaagttatagcataaacatttgcc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 aagcctcaggcataacatttctgttcttttcccttcaaagttatagcataaacatttgcc 523
Query: 123 gttaatgtagaagatccttacttaatgggagctaggaaatgcctttcatcttttagatat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gttaatgtagaagatccttacttaatgggagctaggaaatgcctttcatcttttagatat 463
Query: 183 gcattcttgggtgaaatttgaaaagaaaagtctctctgagattaacttctttgatgtcaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gcattcttgggtgaaatttgaaaagaaaagtctctctgagattaacttctttgatgtcaa 403
Query: 243 aagcttaaaaacagtttaatctttgtgtgtgtttcgaggcttagggtatcttaacccagg 302
|||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 402 aagcttaaaaacagtttaatttttgtgtgtgtttcgaggcttaggggatcttaacccagg 343
Query: 303 gtactacgacaaaatcccaggtcatcgttcatcccgcacacaggtgaaaaggaggggtag 362
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 342 gtactacgacaaaatcccaggtcatcgttcatcccacacacaggtgaaaaggaggggtag 283
Query: 363 agacttcatattttattgttctaaagagggaatccggtgtctatgaagtcttcagagtta 422
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 282 agacttcatattttattgttctaaagagggaatccagtgtctatgaagtcttcagagtta 223
Query: 423 caggcagattttttttaaactatactattttttaaacgaagaacaaattttaaacacagt 482
||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 222 caggcagat------------------ttttttaaacgaagaacaaattttaaacacagt 181
Query: 483 attatattttttgagaatttcatacatgcaatgtatgtgactaacacatataaatgaagt 542
||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 180 attttattttttgacaatttcatgcatgcaatgtatgtgactaacacatataaatgaagt 121
Query: 543 gttttaagaataggaaccatgtatcatgacactttggataatttttttaagaagactcac 602
||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 120 gttttaagactaggaaccatgtatcatgacactttggataa---ttttgagaagactcac 64
Query: 603 ttgtccccatatgttttagatcttaaca 630
|||||| |||||||||||||||||||||
Sbjct: 63 ttgtccgcatatgttttagatcttaaca 36
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_h12.g1 MSMg01no108_h12.g1 CHROMAT_FILE:
MSMg01no108_h12.g1 PHD_FILE: MSMg01no108_h12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:11:21 2005
(245 letters)
>mm_chr6_37285471_37286115
Length = 645
Score = 466 bits (241), Expect = e-136
Identities = 244/245 (99%)
Strand = Plus / Plus
Query: 1 cttgagaattcctggtgctacccagggagtccagtggccactcccagaccaccccacctg 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 cttgagaattcctggtgctacccagggagtccagtggccactcccagaacaccccacctg 260
Query: 61 caaacagagatgctctactcttacacatgggttgggatcccttgcagagagctcggaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaacagagatgctctactcttacacatgggttgggatcccttgcagagagctcggaaag 320
Query: 121 ccaactgcaggcaaacaaaaacaaggtggtgacttacccacggaggctgtgtatggctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaactgcaggcaaacaaaaacaaggtggtgacttacccacggaggctgtgtatggctct 380
Query: 181 gacagaggatgctggctgggcagagccatcttggtggcagaaggataaggcccatagcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacagaggatgctggctgggcagagccatcttggtggcagaaggataaggcccatagcct 440
Query: 241 tgaaa 245
|||||
Sbjct: 441 tgaaa 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
