Query= MSMg01no109_a01.b1 MSMg01no109_a01.b1 CHROMAT_FILE:
MSMg01no109_a01.b1 PHD_FILE: MSMg01no109_a01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:12:02 2005
(326 letters)
>mm_chr6_98361901_98362626
Length = 726
Score = 613 bits (317), Expect = e-180
Identities = 323/325 (99%)
Strand = Plus / Plus
Query: 1 atctaagggcaaaatgtgacaatcaggtcacagggagaacttcaaaatagcatcaaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctaagggcaaaatgtgacaatcaggtcacagggagaacttcaaaatagcatcaaaact 260
Query: 61 gtgttaggataaagttgtcaagaatgaaatgcccatggatgtgcttcttcatgcattctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgttaggataaagttgtcaagaatgaaatgcccatggatgtgcttcttcatgcattctg 320
Query: 121 accctgtttcttgaagtctcatcatagctgtcctatggatgaaatattaaatatgtatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accctgtttcttgaagtctcatcatagctgtcctatggatgaaatattaaatatgtatat 380
Query: 181 cttctttttggatgacttaaatgccataaaaatggaggagtattgaatggtatcttcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttctttttggatgacttaaatgccataaaaatggaggagtattgaatggtatcttcaaa 440
Query: 241 atgttattcagaaatatatatgaagtgaattgtaaaaatatactttatttctgtaatgga 300
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 atgttattcagaaatatagatgaagtgaattgtaaaaatatactttatttctgtaatgaa 500
Query: 301 atcctactgaattttgtatatttgg 325
|||||||||||||||||||||||||
Sbjct: 501 atcctactgaattttgtatatttgg 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no109_a01.g1 MSMg01no109_a01.g1 CHROMAT_FILE:
MSMg01no109_a01.g1 PHD_FILE: MSMg01no109_a01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:12:03 2005
(361 letters)
>mm_chr6_98437315_98438075
Length = 761
Score = 656 bits (339), Expect = 0.0
Identities = 357/365 (97%), Gaps = 4/365 (1%)
Strand = Plus / Minus
Query: 1 ttctttactgtcattgggtttcaaaacatttcagacatcggggataagaggcaatttatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ttctttactgtcattgggtttcaaaacatttcagacatcggggataagaggcaatttatc 663
Query: 61 tagcatcatagaaatgtgagaaaataattttttccttccttttagattttgagaagaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tagcatcatagaaatgtgagaaaataattttttccttccttttagattttgagaagaatc 603
Query: 121 aactgctatttatggaataatata----ttaaaaaaaaaaaccctagaatagagaccttt 176
|||||||||||||||||||||||| || ||||||||| |||||||||||||||||||
Sbjct: 602 aactgctatttatggaataatatatttttttaaaaaaaaagccctagaatagagaccttt 543
Query: 177 ttagagagcaggtcaatagaaggaaaacacagaacactcatttctccaaatcagcggttt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ttagagagcaggtcaatagaaggaaaacacagaacactcatttctccaaatcagcggttt 483
Query: 237 ctttttgcaaaccttattgtccttatctcattgctgggaaaatagcaattactgagtaat 296
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctttttgcaaaccttattgtccttatctcattgctgggaaaatagcaattactgagtaac 423
Query: 297 aggaggctcacttttctcctgcgcacttttcccaggcagagtcaccaattaaaagcattg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 422 aggaggctcacttttctcctgcgcacttttcccaggcagagtcaccaattaaaagtattg 363
Query: 357 ccaga 361
|||||
Sbjct: 362 ccaga 358
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 761
Length adjustment: 9
Effective length of query: 352
Effective length of database: 752
Effective search space: 264704
Effective search space used: 264704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
