| Query= MSMg01no109_o15.g1 MSMg01no109_o15.g1 CHROMAT_FILE:
MSMg01no109_o15.g1 PHD_FILE: MSMg01no109_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:18 2005
(244 letters)
>mm_chr6_142962046_142962689
Length = 644
Score = 252 bits (130), Expect = 2e-71
Identities = 136/138 (98%)
Strand = Plus / Minus
Query: 1 attcttattagcacagaatgtggaagacggtgcagcaagtaccaccagtgagacgtgtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 attcttattagcacagaatgtggaagacggtgcagcaagtaccaccagtgagacgtgtgc 279
Query: 61 atgggagcatacacgtgtgcatgggagcacacacgtgtgcatgggagcacacacgtgtgc 120
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 278 atgggagcacacacgtgtgcatgggagcacacatgtgtgcatgggagcacacacgtgtgc 219
Query: 121 atgggagcacacacgtgt 138
||||||||||||||||||
Sbjct: 218 atgggagcacacacgtgt 201
Score = 159 bits (82), Expect = 2e-43
Identities = 85/86 (98%)
Strand = Plus / Minus
Query: 153 acgtgtgcatgggagcacacacgtgtgcatgggagcacacacgtgtgcatgggagcacac 212
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 286 acgtgtgcatgggagcacacacgtgtgcatgggagcacacatgtgtgcatgggagcacac 227
Query: 213 acgtgtgcatgggagcacacacgtgt 238
||||||||||||||||||||||||||
Sbjct: 226 acgtgtgcatgggagcacacacgtgt 201
Score = 159 bits (82), Expect = 2e-43
Identities = 85/86 (98%)
Strand = Plus / Minus
Query: 133 acgtgtgcatgggagcacacacgtgtgcatgggagcacacacgtgtgcatgggagcacac 192
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 286 acgtgtgcatgggagcacacacgtgtgcatgggagcacacatgtgtgcatgggagcacac 227
Query: 193 acgtgtgcatgggagcacacacgtgt 218
||||||||||||||||||||||||||
Sbjct: 226 acgtgtgcatgggagcacacacgtgt 201
Score = 159 bits (82), Expect = 2e-43
Identities = 85/86 (98%)
Strand = Plus / Minus
Query: 113 acgtgtgcatgggagcacacacgtgtgcatgggagcacacacgtgtgcatgggagcacac 172
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 286 acgtgtgcatgggagcacacacgtgtgcatgggagcacacatgtgtgcatgggagcacac 227
Query: 173 acgtgtgcatgggagcacacacgtgt 198
||||||||||||||||||||||||||
Sbjct: 226 acgtgtgcatgggagcacacacgtgt 201
Score = 132 bits (68), Expect = 2e-35
Identities = 71/72 (98%)
Strand = Plus / Minus
Query: 173 acgtgtgcatgggagcacacacgtgtgcatgggagcacacacgtgtgcatgggagcacac 232
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 286 acgtgtgcatgggagcacacacgtgtgcatgggagcacacatgtgtgcatgggagcacac 227
Query: 233 acgtgtgcatgg 244
||||||||||||
Sbjct: 226 acgtgtgcatgg 215
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 7
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
