Query= MSMg01no110_e06.b1 MSMg01no110_e06.b1 CHROMAT_FILE:
MSMg01no110_e06.b1 PHD_FILE: MSMg01no110_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:47 2005
(553 letters)
>mm_chr6_101118645_101119597
Length = 953
Score = 716 bits (370), Expect = 0.0
Identities = 385/390 (98%)
Strand = Plus / Minus
Query: 8 ttctctacacatgtaaatgtagtttataggtgataatgaaattatcaaaatctgtacctc 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ttctctacacatgtaaatgtagtttataggtgataatgaaattatcaaaatctgtacctc 331
Query: 68 ctttagtaatccacatgaccaccaccccttgaaatgcagggttcagcttctatctcctta 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ctttagtaatccacatgaccaccaccccttgaaatgcagggttcagcttctatctcctta 271
Query: 128 cattaattcaagacaaagcctaacagtcaggtccccaaagcaaactgtcaagaggaggtc 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 cattaattcaagacaaagcctaacagtcaggtccccaaagcaaactgtcaagaggaggtc 211
Query: 188 ctaggaactgggactgtggctcatcggtcaagtgcttgctatgtgagtgctggagtttgc 247
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 210 ctaggaactgggactgtggctcattggtcaagtgcttgctatgtgagtgctggagtttgc 151
Query: 248 attcccaggacctacataaaagccaggtatggggtgacttgtgtttataaccctagaatt 307
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 150 atccccaggacctacataaaagccaggtatggggtgacttgtgtttataaccctagagtt 91
Query: 308 ttcgagagcagggacatgtagatcgtggaggcttactggctgggcagcttagctgaaaca 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 90 ttcgagagcagggacatgtagatcgtggaggcttactggctgggcagcttagctgaagca 31
Query: 368 gcgagctctgagttcaggaaagagaccctt 397
| ||||||||||||||||||||||||||||
Sbjct: 30 gtgagctctgagttcaggaaagagaccctt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no110_e06.g1 MSMg01no110_e06.g1 CHROMAT_FILE:
MSMg01no110_e06.g1 PHD_FILE: MSMg01no110_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:48 2005
(342 letters)
>mm_chr6_100956293_100957034
Length = 742
Score = 472 bits (244), Expect = e-137
Identities = 302/348 (86%), Gaps = 43/348 (12%)
Strand = Plus / Plus
Query: 1 tacagatctagccaaagttactaactgtgccaaaagaggcaaaaaaaaaaaaaaaaaaaa 60
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 203 tacagatctagccaaagttactaattgtaccaaaagaggcaaaaaaaaaaaaaaaaaaaa 262
Query: 61 ------gcaacatcagaatccaggattggtactgtgtattgtctgtcatgttgtcatgtt 114
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aaaaaagcaacatcagaatccaggattggtactgtgtattgtctgtcatgtt-------- 314
Query: 115 tgggttgcagaactgttggtaagacacacagagaaaggggaaagtgtttgggagaagcca 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tgggttgcagaactgttggtaagacacacagagaaaggggaaagtgtttgggagaagcca 374
Query: 175 ccgttaatagacatgatctctggatgtccccagatgctggagtttgtcctggatgtcccc 234
|| ||||||||||||||||||||||||||||||||||||
Sbjct: 375 ccattaatagacatgatctctggatgtccccagatgctg--------------------- 413
Query: 235 agatgctgaagtttgcagacaaagatctcaaagccattattataagctactttacaagaa 294
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 --------aagtttgcagacaaagatctcaaagccattattataagctactttacaagaa 465
Query: 295 aaggatttgtactttagcttggtatcagtctctggagtagcacagggc 342
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 aaggatttgtactttagcttggtatcagtctctggagtagcacagggc 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
