Query= MSMg01no112_i01.b1 MSMg01no112_i01.b1 CHROMAT_FILE:
MSMg01no112_i01.b1 PHD_FILE: MSMg01no112_i01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:40 2005
(353 letters)
>mm_chr6_47036584_47037335
Length = 752
Score = 578 bits (299), Expect = e-169
Identities = 335/347 (96%), Gaps = 1/347 (0%)
Strand = Plus / Plus
Query: 7 attcattataattttccaggtgaaaccagaataactgaaccagatgtactacagagggac 66
||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 207 attcattataattgtcaaggtgagaccagaataactgaaccagatgtactacagagggac 266
Query: 67 agcaaagagagaacacattccagagcatggagtcacctgggacttttgcctgtgagtgat 126
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 agcaaagagagaatagattccagagcatggagtcacctgggacttttgcctgtgagtgat 326
Query: 127 cactcaggtatcatccaccaaactggaaaaagcagaaaggaagggccttgcaggaactga 186
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 327 cactcaggtatcatccaccaaactggaaaaagcagaaaggaaaggccttgcaggaactga 386
Query: 187 cagtggcagatggcaagctccactttatggcaggagatggagggctctgctctatggcag 246
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aagtggcagatggcaagctccactttatggcaggagatggagggctctgctctatggcag 446
Query: 247 gagatgatgagcaagactctgctctatcagttgaggttgaaggtttgaagcaacagagac 306
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gagatgatgagcaaggctctgctctatcagttgaggttgaaggtttgaagcaacagagac 506
Query: 307 aaggtgtggatttatagtaagacacgaacgctgcaaggaagacctca 353
|||||||||||||| ||||||||| ||| || |||||||||||||||
Sbjct: 507 aaggtgtggatttagagtaagaca-gaaggcggcaaggaagacctca 552
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 752
Length adjustment: 9
Effective length of query: 344
Effective length of database: 743
Effective search space: 255592
Effective search space used: 255592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no112_i01.g1 MSMg01no112_i01.g1 CHROMAT_FILE:
MSMg01no112_i01.g1 PHD_FILE: MSMg01no112_i01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:40 2005
(362 letters)
>mm_chr6_47210442_47211202
Length = 761
Score = 598 bits (309), Expect = e-175
Identities = 324/329 (98%), Gaps = 1/329 (0%)
Strand = Plus / Minus
Query: 34 acacacacacacacacacacacaattgttgtttgtttttaacaaagcaagtacttcaaag 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 acacacacacacacacacacacaattgttgtttgtttttaacaaagcaagtacttcaaag 525
Query: 94 agattgaagtaggctgtctgaaaagcacagcagcccagtggattctgggttgggggactt 153
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 524 agattgaagtaggctgtctgaaaagcacagcagcccagtggattctgggtt-ggggactt 466
Query: 154 cagagatggtatgtgagtacttagaaggtgggtggtgtgttataatgaagtctaggtctt 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 cagagatggtatgtgagtacttagaaggtgggtggtgtgttataatgaagtctaggtctt 406
Query: 214 cataaacaagaatgctagatcttgggatgccaatggaactgaattgttgagttgtgctta 273
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 cataaacaagaatgccagatcttgggatgccaatggaactgaattgttgagttgtgctta 346
Query: 274 actcagagatccagctatggagaaggcagcacattaagaccctcaaattttccttctcac 333
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 345 attcagagatccagctatggagaaggcagcacattaagaccctcaaattttccttcccac 286
Query: 334 ttgtgtccagccctgagattataaaagga 362
|||||||||||| ||||||||||||||||
Sbjct: 285 ttgtgtccagccatgagattataaaagga 257
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 761
Length adjustment: 9
Effective length of query: 353
Effective length of database: 752
Effective search space: 265456
Effective search space used: 265456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
