This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
Click to search
Search Parameter
BAC name
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search by nearby gene name.
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Search Result
BAC
Clone Name
MSMg01-112I04
Chromosome
6 (Build37)
Map Location
74,032,216 - 74,032,463
singlet/doublet
singlet
Overlap gene
none
Upstream gene
Dnahc6
,
Suclg1
,
Olfr210-ps1
,
4931417E11Rik
,
LOC100043338
Downstream gene
none
Link
Open Mouse BAC browser
Click to get alignment info.
name
Dnahc6
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:330355
MGI:107744
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 7 Proteins
name
Suclg1
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:56451
MGI:1927234
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Olfr210-ps1
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:257960
MGI:3030044
definition
gene_synonym
: MOR115-3P
note
: olfactory receptor 210, pseudogene 1
pseudo
: _no_value
name
4931417E11Rik
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:66740
MGI:1913990
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC100043338
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100043338
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 4 Proteins
pseudo
: _no_value
name
Dnahc6
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:149255215
GeneID:330355
MGI:107744
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 8 ESTs, 7 Proteins
product
: dynein, axonemal, heavy chain 6
transcript_id
: XM_913416.3
name
Suclg1
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:142384185
GeneID:56451
MGI:1927234
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: succinate-CoA ligase, GDP-forming, alpha subunit
transcript_id
: NM_019879.2
name
4931417E11Rik
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:141802493
GeneID:66740
MGI:1913990
definition
exception
: mismatches in transcription
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: RIKEN cDNA 4931417E11 gene
transcript_id
: NM_025737.2
name
Dnahc6
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:149255216
GeneID:330355
MGI:107744
definition
codon_start
: 1
product
: axonemal dynein heavy chain
protein_id
: XP_918509.3
name
Suclg1
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:9845299
CCDS:CCDS20246.1
GeneID:56451
MGI:1927234
definition
GO_component
: GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA]
GO_function
: GO:0003824 - catalytic activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004776 - succinate-CoA ligase (GDP-forming) activity [Evidence IEA]
GO_process
: GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
codon_start
: 1
exception
: mismatches in translation
note
: succinyl-CoA synthetase
product
: succinate-CoA ligase, GDP-forming, alpha subunit
protein_id
: NP_063932.1
name
4931417E11Rik
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:13385198
GeneID:66740
MGI:1913990
definition
codon_start
: 1
product
: hypothetical protein LOC66740
protein_id
: NP_080013.1
name
(CDS detail)
type
STS
link
xref
UniSTS:130973
definition
standard_name
: D6Mit71
name
(CDS detail)
type
STS
link
xref
UniSTS:130728
definition
standard_name
: D6Mit186
name
(CDS detail)
type
STS
link
xref
UniSTS:130794
definition
standard_name
: D6Mit245
name
(CDS detail)
type
STS
link
xref
UniSTS:130667
definition
standard_name
: D6Mit126
name
(CDS detail)
type
STS
link
xref
UniSTS:130875
definition
standard_name
: D6Mit320.1
name
(CDS detail)
type
STS
link
xref
UniSTS:130874
definition
standard_name
: MTH940
name
(CDS detail)
type
STS
link
xref
UniSTS:124709
definition
standard_name
: 48.MMHAP9FRH12.seq
name
(CDS detail)
type
STS
link
xref
UniSTS:130909
definition
standard_name
: D6Mit358
name
LOC100043338
(CDS detail)
type
misc_RNA
link
vega
ensembl
NCBI
xref
GI:149255254
GeneID:100043338
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 4 Proteins
product
: similar to cofactor A
pseudo
: _no_value
transcript_id
: XR_034217.1
clone name
MSMg01-098F13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-101B20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-368G07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-382I19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-108E19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-536O12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-130A20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-292C08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-069O18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-298I05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-536D16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-523K22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-057C13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-065K18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-507J11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-053G15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-433K15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-123B10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-448B07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-362L24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-406E19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-237H24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-525N21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-298E15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-348L02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-399B20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-052M09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-341E15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-508B13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-390P23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-458J01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-428M13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-082A06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-081P14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-235L23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-118A15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-532N05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-350K11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-112I04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-484A20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-450G04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-063A21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-534I15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-473F01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-079A15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-076L03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-531F02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-313N23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-327B09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-115H19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-510D10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-392O04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-106B21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-110F14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-440G12
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-452F02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-121N08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-448I19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-288A16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-417N15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-460E10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-276O13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-331L12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-501M14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-264C23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-104G03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-047M11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-448N18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-065M04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-218F08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-298H04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-417K19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-449L17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-093O22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-093O23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-536I14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-131F07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-344J18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-395K05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-302F19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-129I09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-314I21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-236H14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-218H22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-287D08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-136A12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-028A02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-009P23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-169D07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-193O13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-239I10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-195L15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-061C14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-019A07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-147M01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-030H03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-272D22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-276I03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-300H13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-068G24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-324C22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-331H08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-242J07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-002D21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-278F05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-178D03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-111F07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-154E13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-155N07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-075I05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-077O19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-337O05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-321H17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-165G23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-164B18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-120L06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-116O02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-196L10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-017L12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-108J19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-221L16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-302P02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-172I16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-280P13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-006K12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-157H21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-182N18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-032O07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-297L15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-234M02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-294F08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-251J05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-281F23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-333F06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-142B15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-228M10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-005A22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-157F05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-205E19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-286H08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-010E01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-209K09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-221L17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-020J01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-176H20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-144P13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-036P21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-065A08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-341P15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-117B08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-100D08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-333E12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-153C21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-252E10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-056K22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-235O11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-260N05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-297J03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-094B09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-081L18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-203H22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-106A09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-202N23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-330H01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-111E17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-253H02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-102B16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-174O16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-190E21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-259A14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-100F17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-199K08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-240N04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-055K08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-231K01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-307P18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-064N23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-085N07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-029O22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-150D07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-320N02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-111C09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-179F10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-141G09
singlet/doublet
doublet
plural/unique
unique