Query= MSMg01no113_i21.b1 MSMg01no113_i21.b1 CHROMAT_FILE:
MSMg01no113_i21.b1 PHD_FILE: MSMg01no113_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:01 2005
(451 letters)
>mm_chr6_93113441_93114291
Length = 851
Score = 719 bits (372), Expect = 0.0
Identities = 432/452 (95%), Gaps = 2/452 (0%)
Strand = Plus / Minus
Query: 1 tcacttctgagaaaaagctgcactcagttttgaacttacatgattcctactcgggaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 651 tcacttctgagaaaaagctgcactcagttttgaacttacatgattcctact-gggaggaa 593
Query: 61 agaaggatagttttactaactcaaaagcaggagacaagatgagagcttttggctggaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 agaaggatagttttactaactcaaaagcaggagacaagatgagagcttttggctggaagg 533
Query: 121 ttgctgggttttatacatacagggcatgtaggagctagagatggagaagctgatctagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ttgctgggttttatacatacagggcatgtaggagctagagatggagaagctgatctagcc 473
Query: 181 tcggagacacctctgtagtactagccaagcctaaaagaatttctacaatatttgagaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 472 tcggagacacctctgtagtactagccaagcctaaaagaatttctacaatatttgaaaaaa 413
Query: 241 -tctaataggtattattgggataggaacacctgcacttaaattggggttgggaagggtct 299
| ||||||||| | ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 412 atataataggtaagagggggataggaacacctgcacttaaattggggtagggaagggtct 353
Query: 300 ataatgaatcttatttgcttgatgtttaccatttcaacatttttatttacttagggtgga 359
||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 352 ctaacgaatcttatttgcttgatgtttaccatttgaacatttttatttactgagggtgga 293
Query: 360 gcgtctgcctgtgtgtgaatatctggaggatcagaaatcaaccttgggccttcctctatt 419
| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 292 gtgtctgcctgtgtgtgaatatctggaggaccagaaatcaaccttgggtcttcctctatt 233
Query: 420 atgtttcacgttactttttgaaacaggatctc 451
|||||| || ||||||||||||||||||||||
Sbjct: 232 atgttttacattactttttgaaacaggatctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no113_i21.g1 MSMg01no113_i21.g1 CHROMAT_FILE:
MSMg01no113_i21.g1 PHD_FILE: MSMg01no113_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:01 2005
(373 letters)
>mm_chr6_93025993_93026765
Length = 773
Score = 683 bits (353), Expect = 0.0
Identities = 368/373 (98%)
Strand = Plus / Plus
Query: 1 atgttctgcagctctgtgaaccatggagcagtcaatgcatgttatcctagctctgcacgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 atgttctgcagctctgtgaaccatggagcagtcaatgcatgttatcctagctctgcatgg 260
Query: 61 ggcagcttgattttcctcttcttggtgctgagggaaatgtctttggtggtttgggaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggcagcttgattttcctcttcttggtgctgagggaaatgtctttggtggtttgggaaatg 320
Query: 121 gccattgactttctcacctgggtaatttcccatcttaagaaagttttgactttcttaata 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccattgactttctcacctgggtaatttcccatcttaagaaagttttgactttcttaatg 380
Query: 181 tatgaggtttttgtctaggtgggagggggagggaatcagacattaccttgggtttactca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatgaggtttttgtctaggtgggagggggagggaatcagacattaccttgggtttactca 440
Query: 241 atccctagatgaagaactaactacctaggtgtgtacatattgtcctaataacttgggtga 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 atccctagatgaagaactaactacctaggtgtgtacatattgtcctaataacctgggtga 500
Query: 301 ttaattcagggtggtccaagtcagtttgagatcagcctgggtaacatcaacataaaatca 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 ttaattcagggtggtccaagtcagtttgagatcagcctgggcaacatcaacataaaatca 560
Query: 361 ttgcctagtgtaa 373
|| ||||||||||
Sbjct: 561 ttacctagtgtaa 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 773
Length adjustment: 9
Effective length of query: 364
Effective length of database: 764
Effective search space: 278096
Effective search space used: 278096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
