Query= MSMg01no114_e14.b1 MSMg01no114_e14.b1 CHROMAT_FILE:
MSMg01no114_e14.b1 PHD_FILE: MSMg01no114_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:56 2005
(440 letters)
>mm_chr6_97799690_97800529
Length = 840
Score = 799 bits (413), Expect = 0.0
Identities = 431/437 (98%)
Strand = Plus / Plus
Query: 4 ggaattcactctgtagacccggctggtctctaactcagacagatttgcctgcctctgcat 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactctgtagaccaggctggtctctaactcagacagatttgcctgcctctgcat 263
Query: 64 cctgagtgctgggattaaaggcatacactacctctgtccagccaaggctggaatgttaac 123
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 264 cctgagtgctgggattaaaggcatacactacctctgcccagccaaggctggaatgttaac 323
Query: 124 caaagctaggatgttaaccaatgctgggatgttaaccaatgctgggatgctaaggctggg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caaagctaggatgttaaccaatgctgggatgttaaccaatgctgggatgctaaggctggg 383
Query: 184 atactaactagggctgggatgttaactaaggctgggatgttaaccacacttaaccagggc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atactaactagggctgggatgttaactaaggctgggatgttaaccacacttaaccagggc 443
Query: 244 attggtagtccagagcttgtactccgtagcaaacatactcatatatgttacatatataca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 attggtagtccagagcttgtactccgtagcaaacatactcatatatgttacatatataca 503
Query: 304 taccagaccattaaagcccttcattatgtttgcggcttctcatctagccttctatacaat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 taccagaccattaaagcccttcattatgtttgcggcttctcatctagccttctatacaat 563
Query: 364 tacaatgtaaagttctgaaatctcagtgactaacaaatttggccattatcttagggcttt 423
||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||
Sbjct: 564 tacaatgtaaagttctgaaatttcagtgactaacaaatttgggtattatcttagggtttt 623
Query: 424 actgctgtgaacagaca 440
|||||||||||||||||
Sbjct: 624 actgctgtgaacagaca 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no114_e14.g1 MSMg01no114_e14.g1 CHROMAT_FILE:
MSMg01no114_e14.g1 PHD_FILE: MSMg01no114_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:56 2005
(654 letters)
>mm_chr6_97868542_97869597
Length = 1056
Score = 969 bits (501), Expect = 0.0
Identities = 516/521 (99%), Gaps = 2/521 (0%)
Strand = Plus / Minus
Query: 136 gagctgggctgtgccgctccacaacccacagtcctctgtttcacgtttacaaaagccact 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 gagctgggctgtgccgctccacaacccacagtcctctgtttcacgtttacaaaagccact 997
Query: 196 caaggatcaaaagagtgaagcagttctaaaattagacctggggctggactcccttcattc 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 caaggatcaaaagagtgaagcagttctaaaattagacctggggctggactcccttcattc 937
Query: 256 ctgaccctaaccgaggccccactggatttctgcattccgtgaaggcatggaccatatctg 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 ctgaccctaaccgaggccccactggatttctgcattccgtgaaggcatggaccatatctg 877
Query: 316 ttctgtttaccactccacccatgaactacagttccacaccagggagacactcagcaccca 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 ttctgtttaccactccacccatgaactacagttccacaccagggagacactcagcaccca 817
Query: 376 ctgggcagtgcgttcaatgattaattcattaacatggtgcattcactgtcacctgtggcg 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 ctgggcagtgcgttcaatgattaattcattaacatggtgcattcactgtcacctgtggcg 757
Query: 436 aggatctgactttgtaaaaccacacacaagagttaggcagactttcctgaatattcatag 495
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 756 aggatctgactttgtaaaaccacacacaagagttaggcagaccttcctgaatattcatag 697
Query: 496 cgaacaagagttaaaataatggcagttactagacagaaactaagaagaaacactgccctt 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 cgaacaagagttaaaataatggcagttactagacagaaactaagaagaaacactgccctt 637
Query: 556 aaatcgcctgctttaaaggggcctgggaaaacgtgaacttgcaatgatttttttttttt- 614
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 636 aaatcgcctgctttaaaggggcctgggaaaacgtgaaattgcaatgattttttttttata 577
Query: 615 ta-ataaagcaaagctgaattgctcggcaggtgaaggagct 654
|| ||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tatataaagcaaagctgaattgctcggcaggtgaaggagct 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1056
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1046
Effective search space: 673624
Effective search space used: 673624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
