Query= MSMg01no115_c10.b1 MSMg01no115_c10.b1 CHROMAT_FILE:
MSMg01no115_c10.b1 PHD_FILE: MSMg01no115_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:01 2005
(496 letters)
>mm_chr6_32798521_32799414
Length = 894
Score = 843 bits (436), Expect = 0.0
Identities = 478/494 (96%), Gaps = 6/494 (1%)
Strand = Plus / Minus
Query: 5 gaattctccatccctagggcagtttgggagccttcctacactttgttttgtcagcagtga 64
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 gaatgctccatccctagggcagtttgggagccttcctacactttgttttgtcagcagtga 635
Query: 65 gggaagtctgtggaatgttccctccgactaccattttcccagctccagtgccagcaaatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 gggaagtctgtggaatgttccctccgactaccattttcccagctccagtgccagcaaatg 575
Query: 125 ctcaggcttcattcacactttgaagaggctttaggattcgtagtttagagagaagctctc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ctcaggcttcattcacactttgaagaggctttaggattcgtagtttagagagaagctctc 515
Query: 185 actgtgcctgaggtggtgctttctagctactgcctgctaggccgaacatctcggagctgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 actgtgcctgaggtggtgctttctagctactgcctgctaggccgaacatctcggagctgt 455
Query: 245 gactataagaggggcttcctaacctcaaagagtagaaattgctgagaagagtcccatgtc 304
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 454 gactataagaggggcttcctaacctcaaagagtaggaattgctgagaagagtcccatgtc 395
Query: 305 cccatagaagattgaccatcaaaatctcatggccctccgtctgttccaaagcagtgcact 364
|| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 394 tccgtagaagattgaccatcaaaatctcatgaccctccgtctgttccaaagcagtgcact 335
Query: 365 gtattccaccg--catagctgctgtcttatctggcccggcgactctggctgcttcctctc 422
||||| | | ||||||||| ||||| ||||||||| || |||||||||||||||||
Sbjct: 334 gtatttta--gtacatagctgc--tcttacctggcccggtgattctggctgcttcctctc 279
Query: 423 tgtatacctgtgtagcacctgtgagcttctctttgaagctggctgaccatcttgaacctg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tgtatacctgtgtagcacctgtgagcttctctttgaagctggctgaccatcttgaacctg 219
Query: 483 aactcggcaatctc 496
||||||||||||||
Sbjct: 218 aactcggcaatctc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 894
Length adjustment: 10
Effective length of query: 486
Effective length of database: 884
Effective search space: 429624
Effective search space used: 429624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no115_c10.g1 MSMg01no115_c10.g1 CHROMAT_FILE:
MSMg01no115_c10.g1 PHD_FILE: MSMg01no115_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:01 2005
(471 letters)
>mm_chr6_32623058_32623928
Length = 871
Score = 888 bits (459), Expect = 0.0
Identities = 468/471 (99%)
Strand = Plus / Plus
Query: 1 cctgtctcctgtaatctttttaagcacactctgtttgttgtcagagctttcccctattgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctgtctcctgtaatctttttaagcacactctgtttgttgtcagagctttcccctattgc 260
Query: 61 tggatgaaacatggagtatgttctaagacttatcttgttagtcttgattagtacaaaccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggatgaaacatggagtatgttctaagacttatcttgttagtcttgattagtacaaaccg 320
Query: 121 ctcttcattgtcattatttcaaacagcatgcctccatttgaatcaatcgtttaggtcttt 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcttcattgtcgttatttcaaacagcatgcctccatttgaatcaatcgtttaggtcttt 380
Query: 181 gtaaaagacacctttgatcctggttttaggctaaaactcctctgatttgctcactgtctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaaaagacacctttgatcctggttttaggctaaaactcctctgatttgctcactgtctg 440
Query: 241 agactctgggggatgggagggacatatgctttcttatggcacttctgccaatgcttccgt 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agactctgggagatgggagggacatatgctttcttatggcacttctgccaatgcttccgt 500
Query: 301 ttctccttatctagcttgcttgctgtgcttcagctctctgatgatggagcagtggaataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttctccttatctagcttgcttgctgtgcttcagctctctgatgatggagcagtggaataa 560
Query: 361 agaaatagaaataggtagaggaaaatatgaatgactggtgtcagtgtggagatttagcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaaatagaaataggtagaggaaaatatgaatgactggtgtcagtgtggagatttagcaa 620
Query: 421 gctctgggcttggcagatataaactctgtctcaatacacacacgcacacac 471
||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 621 gctctgggcttggcagatataaactctgtctcaatacacacacacacacac 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
