Query= MSMg01no115_i07.b1 MSMg01no115_i07.b1 CHROMAT_FILE:
MSMg01no115_i07.b1 PHD_FILE: MSMg01no115_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:29 2005
(292 letters)
>mm_chr6_106358628_106359320
Length = 693
Score = 514 bits (266), Expect = e-150
Identities = 285/292 (97%), Gaps = 5/292 (1%)
Strand = Plus / Minus
Query: 4 gaattcacttgccta-tccga-aaaagcaccttgtcactacaaat-aaaaaaaaaatata 60
||||||||||||||| | || ||||||||||||||||||||||| ||||||||||||||
Sbjct: 493 gaattcacttgcctagt--gacaaaagcaccttgtcactacaaataaaaaaaaaaatata 436
Query: 61 tgggtggcagaaaaggcacctcattggtcagcctgtaaacactatcctctaaccaatgat 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tgggtggcagaaaaggcagctcattggtcagcctgtaaacactatcctctaaccaatgat 376
Query: 121 aagaacattgtgttgctaaagccactggacacagctaactattcaacatcacaggaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aagaacattgtgttgctaaagccactggacacagctaactattcaacatcacaggaaaca 316
Query: 181 aagtaattttcctcaactcaaccgaggggctggtttgaccgatgtgttaaacagtaagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aagtaattttcctcaactcaaccgaggggctggtttgaccgatgtgttaaacagtaagtt 256
Query: 241 ctccagcagaacattccacagaaagcttgtctgctggggggttgagccatgc 292
|||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 255 ctccagcagaacattccacagaaagcttgtctgctggggggttgagtcatgc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 693
Length adjustment: 9
Effective length of query: 283
Effective length of database: 684
Effective search space: 193572
Effective search space used: 193572
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no115_i07.g1 MSMg01no115_i07.g1 CHROMAT_FILE:
MSMg01no115_i07.g1 PHD_FILE: MSMg01no115_i07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:29 2005
(356 letters)
>mm_chr6_106185703_106186458
Length = 756
Score = 658 bits (340), Expect = 0.0
Identities = 352/356 (98%)
Strand = Plus / Plus
Query: 1 acttatgttgaaggaggtgcatggagttgaatcctccttcaggtaaaaatgatttagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttatgttgaaggaggtgcatggagttgaatcctccttcaggtaaaaatgatttagaag 260
Query: 61 agaaaagatcagaatggagtctgaaaataaatctttcgtttacctaaggagagcaaagta 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaaagatcaggatggagtctgaaaataaatctttcgtttacctaaggagagcaaagta 320
Query: 121 tattcctttaagtttttattttaaatgggaaaagaataaaaggaaaatagggaataaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattcctttaagtttttattttaaatgggaaaagaataaaaggaaaatagggaataaaag 380
Query: 181 gaaaataaagaagggaagatactgcgtcacatgaaaatgaattcaagatccacagacatg 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaaataaagaagggaagatactgtgtcacatgaaaatgaattcaagatccacagacatg 440
Query: 241 acccaaagattaggctaagaaatacttcattctttatggtctaggcttaagccatttttt 300
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 acccaaaaattaggctaagaaataattcattctttatggtctaggcttaagccatttttt 500
Query: 301 ggaaaaacctacagacatttctgtattagggccctttgaaaactcccatagaatag 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggaaaaacctacagacatttctgtattagggccctttgaaaactcccatagaatag 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 756
Length adjustment: 9
Effective length of query: 347
Effective length of database: 747
Effective search space: 259209
Effective search space used: 259209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
