Query= MSMg01no117_c24.b1 MSMg01no117_c24.b1 CHROMAT_FILE:
MSMg01no117_c24.b1 PHD_FILE: MSMg01no117_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:39 2005
(491 letters)
>mm_chr6_52831403_52832293
Length = 891
Score = 632 bits (327), Expect = 0.0
Identities = 336/341 (98%), Gaps = 4/341 (1%)
Strand = Plus / Minus
Query: 155 ttttggccagttactattctctaagtagtcttcatatgccacaaagagaaactgctttgg 214
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 891 ttttggccagttactattctgtaagtagtcttcatatgccacaaagagaaactgctttgg 832
Query: 215 tgaggagtgagaaccacacttgtatgtgctgtgaggatcagtatttaggaagcagttaga 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 tgaggagtgagaaccacacttgtatgtgctgtgaggatcagtatttaggaagcagttaga 772
Query: 275 agttatattgattaaggagaatggcagt----gattctcctccagggtctatcatctctc 330
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 771 agttatattgattaaggagaatggcagtggtagattctcctccagggtctatcatctctc 712
Query: 331 cagtcattggctgattaggtaaaagtcaaatgctaatttagtgtgaaaacttagtttaag 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 cagtcattggctgattaggtaaaagtcaaatgctaatttagtgtgaaaacttagtttaag 652
Query: 391 tcctgaaagctcagattccctggacataagaaccctatagtctctcaaggccactgagtg 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 tcctgaaagctcagattccctggacataagaaccctatagtctctcaaggccactgagtg 592
Query: 451 tagacaggtcacattctgtcttagggacctacctggttcta 491
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tagacaggtcacattctgtcttagggacctacctggttcta 551
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no117_c24.g1 MSMg01no117_c24.g1 CHROMAT_FILE:
MSMg01no117_c24.g1 PHD_FILE: MSMg01no117_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:23:39 2005
(333 letters)
>mm_chr6_52690393_52691125
Length = 733
Score = 600 bits (310), Expect = e-176
Identities = 327/334 (97%), Gaps = 5/334 (1%)
Strand = Plus / Plus
Query: 1 agggtacaaactgaaagttaacatccttttttgctataagattgtaagattgtaatttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agggtacaaactgaaagttaacatccttttttgctataagattgtaagattgtaatttaa 260
Query: 61 agttacatgaattatacatgtatatttacattttaactcaaatgagagagaggagagaga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 agttacatgaattatacatgtatatttacattttaactcaaatgagagagag---agaga 317
Query: 121 gagagagagagagagagagagagagagagattatagaacctttttccttttgagacaggt 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 318 gagagagagagagagagagagagagagagattgtagaacctttttccttttgagacaggt 377
Query: 181 tctcactatgcaaccctagctgtccagaaacttggtatgtaggtcaggcagggctcaaac 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tctcattatgcaaccctagctgtccagaaacttggtatgtaggtcaggcagggctcaaac 437
Query: 241 tcaagagactgccttctttctgccttttgaatgctgggattaaagatgctc-ggctccat 299
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 438 tcaagagactgccttctttctgccttttgaatgctgggattaaagatg-tccggctccat 496
Query: 300 gactagctacaagatactactaggaatacactta 333
||||||||||||||||||||||||||||||||||
Sbjct: 497 gactagctacaagatactactaggaatacactta 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
