Query= MSMg01no121_b16.b1 MSMg01no121_b16.b1 CHROMAT_FILE:
MSMg01no121_b16.b1 PHD_FILE: MSMg01no121_b16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:46 2005
(289 letters)
>mm_chr6_35076848_35077535
Length = 688
Score = 518 bits (268), Expect = e-151
Identities = 283/290 (97%), Gaps = 5/290 (1%)
Strand = Plus / Minus
Query: 2 tgtgtgtgtctgtctgtctgtctgtctgcctgcctgtctgtctgtctgtctcgtcttgct 61
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 539 tgtgtgtgtctgtctgtctgtctgtctgcctgcctgcctgtctgtctgtctcgtcttgct 480
Query: 62 ctcactctcttgctctctcaactgtagctaggcatggtactatagatctgtaatgtcaat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ctcactctcttgctctctcaactgtagctaggcatggtactatagatctgtaatgtcaat 420
Query: 122 cagtaatgtcagaatttagaggctgatttgagcctcaacagtgagaccctgtttcaaaaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 cagtaatgtcagaatttagaggctgatttgagcctcaacagtgagaccctgtttcaaaaa 360
Query: 182 gccaaaccaaaccttttaatgtaccacagacccatttcagtgtaccaggatccacaacag 241
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 359 gccaaaccaaaccttttaatgtaccacagacccatttcagtgtaccagaatccacaacag 300
Query: 242 ccatcttt--cctttgaaaaaaggtattacaatgtgttttatgtatattt 289
||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ccatc---gccctttgaaaaaaggtattacaatgtgttttatgtatattt 253
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 688
Length adjustment: 9
Effective length of query: 280
Effective length of database: 679
Effective search space: 190120
Effective search space used: 190120
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no121_b16.g1 MSMg01no121_b16.g1 CHROMAT_FILE:
MSMg01no121_b16.g1 PHD_FILE: MSMg01no121_b16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:46 2005
(289 letters)
>mm_chr6_34946216_34946904
Length = 689
Score = 489 bits (253), Expect = e-143
Identities = 277/285 (97%)
Strand = Plus / Plus
Query: 1 atctggcgggagagaaagacattaatcaaggaagtgtgaggaccactgcacgctctcggc 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 atctggcgggagagaaagacattaatcaaggaagtgcgaggaccactgcacgctctcggc 260
Query: 61 tgagatgagggctagagttctctctcttgaactgggtcgcagcctcaagtcgcggacctg 120
|||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||
Sbjct: 261 tgagatgagggctagagttctcgctcttgaactgggttgcagcctcaagtcgtggacctg 320
Query: 121 gatgggagggtgctgatgaacttgccaatagtaaaaggacccaaaaatgaattcaaaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatgggagggtgctgatgaacttgccaatagtaaaaggacccaaaaatgaattcaaaatt 380
Query: 181 aaaatcgttgtgaatcagaggaatttccattggtgttcaccgtccttggctccgagagta 240
||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||
Sbjct: 381 aaaatcgttgtgaatcagaggaatttccattggtgttcatcgcccttggctccaagagta 440
Query: 241 gaacatgtctctttgcactgatgccatcatgccagccactgaatg 285
||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 gaacatgtcactttgcactgatgccatcatgccagccactgaatg 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
