Query= MSMg01no121_d03.b1 MSMg01no121_d03.b1 CHROMAT_FILE:
MSMg01no121_d03.b1 PHD_FILE: MSMg01no121_d03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:53 2005
(195 letters)
>mm_chr6_93370535_93371127
Length = 593
Score = 313 bits (162), Expect = 3e-90
Identities = 184/192 (95%), Gaps = 2/192 (1%)
Strand = Plus / Minus
Query: 1 atgagtattttatttacataatttctatcgcatattctcctcttccaatctttttgtatc 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 390 atgagtattttatttacataatttctatcgcatattctcttcttccaatctttttgtatc 331
Query: 61 tcttttactcctcaacttaacgtgtccttcttaaatagcgttgtaatagtaacacacaca 120
||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 330 tcttttactcctcaacttaacacatccttcttaaatagcgttgtaatagta--acacaca 273
Query: 121 cacatgtgtgtataaatgttatctgttgagtccatttatagttgctcatacatataaggg 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 272 cacatgtgtgtataaatgttatctgttgagtccatttagagttgctcatacatctaaggg 213
Query: 181 ctgacatttagg 192
||||||||||||
Sbjct: 212 ctgacatttagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 593
Length adjustment: 8
Effective length of query: 187
Effective length of database: 585
Effective search space: 109395
Effective search space used: 109395
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no121_d03.g1 MSMg01no121_d03.g1 CHROMAT_FILE:
MSMg01no121_d03.g1 PHD_FILE: MSMg01no121_d03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:28:54 2005
(286 letters)
>mm_chr6_93217168_93217853
Length = 686
Score = 538 bits (278), Expect = e-157
Identities = 284/286 (99%)
Strand = Plus / Plus
Query: 1 attatgacgtgggcataacaaagttaggaaagtgctagctgcttatacccgaaggtctgt 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 attatgacgtgggcataacaaagttaggaaagtgctagctgcttatacatgaaggtctgt 260
Query: 61 gtttgatcctcagaaactgtacaaagatgtaggctgtgcagtgcacacttgtagctccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttgatcctcagaaactgtacaaagatgtaggctgtgcagtgcacacttgtagctccag 320
Query: 121 ggttggggagacagagacaggcattccccaggggctcactgagcaacaggcaatcttgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggttggggagacagagacaggcattccccaggggctcactgagcaacaggcaatcttgat 380
Query: 181 ggtctctacatgcacgtgcataacatgtgcactcacacaaacacaccacccatacagatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtctctacatgcacgtgcataacatgtgcactcacacaaacacaccacccatacagatg 440
Query: 241 gtaattcctcatgacaaagtcgagtttattgcagttattgaaggaa 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtaattcctcatgacaaagtcgagtttattgcagttattgaaggaa 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
