Query= MSMg01no121_h12.b1 MSMg01no121_h12.b1 CHROMAT_FILE:
MSMg01no121_h12.b1 PHD_FILE: MSMg01no121_h12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:15 2005
(288 letters)
>mm_chr6_42207380_42208067
Length = 688
Score = 549 bits (284), Expect = e-161
Identities = 287/288 (99%)
Strand = Plus / Minus
Query: 1 gacttcctgagtttcaggccagcctgggagactcagaaagatattgtattgaaaataaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gacttcctgagtttcaggccagcctgggagactcagaaagatattgtattgaaaataaaa 429
Query: 61 gtaaacaaataaataaatagcagatagctgaatgagttgcatgtctatgcatccctaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gtaaacaaataaataaatagcagatagctgaatgagttgcatgtctatgcatccctaaat 369
Query: 121 tccagcaagccgaaggcctcagggttaagtatgcaatttagaggttgacaaaccggtttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tccagcaagccgaaggcctcagggttaagtatgcaatttagaggttgacaaaccggtttc 309
Query: 181 aaacctcaattacgtcacttatggacgcttacagtatgctgggtggggttacagtgcatc 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 308 aaacctcaattacgtcacttatggacacttacagtatgctgggtggggttacagtgcatc 249
Query: 241 catttctaatctgcaaccttttgaagaaaaaaaaaaagcctctgctta 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 catttctaatctgcaaccttttgaagaaaaaaaaaaagcctctgctta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no121_h12.g1 MSMg01no121_h12.g1 CHROMAT_FILE:
MSMg01no121_h12.g1 PHD_FILE: MSMg01no121_h12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:15 2005
(290 letters)
>mm_chr6_42064214_42064902
Length = 689
Score = 532 bits (275), Expect = e-155
Identities = 287/291 (98%), Gaps = 2/291 (0%)
Strand = Plus / Plus
Query: 1 gtggtgacaaacagaaac-aacacagaggcagtttgaatctgagtgtattttgtagctct 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gtggtgacaaacagaaacaaacacagaggcagtttgaatctgagtgtattttgtagctct 259
Query: 60 caatcaagggtttttaatacataaacaaataattattacaattctgagaagatgtattaa 119
||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 260 caatcaagggttttt-atacataaacaaacaattattacaattctgagaagatgtattaa 318
Query: 120 atgaagcagtcacggataggatcatcatagtcatttggcacaataaaacccaaaaccatc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 atgaagcagtcacggataggatcatcatagtcatttggcacaataaaacccaaaaccatc 378
Query: 180 caaggctagctagtggcataattccaagagcatagtaataaaattttatggacagttatt 239
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 379 caaggctagctagtggcataattccaagagcatagtaataaaattttatggatagttatt 438
Query: 240 atttaacatctagtacctgttcttttttatgaatctttgaaacataaattt 290
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 atttaacatctagtacctgttcttttttatgaatctttgaaacataaattt 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 689
Length adjustment: 9
Effective length of query: 281
Effective length of database: 680
Effective search space: 191080
Effective search space used: 191080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
