ACCTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCACTATGCGTTATGCTTCATATACAGCATCTCATTTAATTTT
TAAAATTCTCTTCAAATCGCTGACCATGATGACCATAGCTGAAGTGTGTT
TAGTGACCTAACTAGAACAATAACATGTGTAAATTGATAGGTTATGAAGA
TAAATATTTTACAAGGCAACCTGAGGCAATTTGCCAGTGATGACCTGCCT
CCTGAGACATGAGCAATTCCACAGCAATTTTCTTAATGTTGGAAAAGCAC
AAGATGGACAGTAGATTTACTGGCGAGAAATATAATCTCTGTAATGGCCT
TTGTTACATTTTGCAGCTTATACCACATTTCTGTGAGACAAATGTGACTC
ACTTAGTTTGTGGTGAATTCTTTAGGGTCCATTTGTCTTCACGAATGTGT
CAGAAAAGACTGTAAAGGCATCACGGAGTGTGTTCCTCAGGGGAGTTTTA
TCTGCTCTTTAATACAGTAGCCATTTGTAAAATGCTGCAGGAGAAAAAAT
AAGTCAGAAGAAACTCATCAGGGCTAATGCACCTTACTTTGAAAAGGCAG
TACAAATGAAGCAAGAGAATGCTTTACTGAATGTTTTCTTTCAGGCCTGA
AGAGTAATCATAAAGGGTCAGGAAGAAGATCATGTTCACAGGTAAAATAC
AGGCATTCTCTCN

CAATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTGTCCCTTAAACTCAAAGTTGAGAACA
AAAAGGCAATGTCAGATTTGATCAGAGTTCCACTCTGAATTGTTACCTTA
TTCAGGTTATGGTCTGCACTTCCGTTATGCCTGAACACATGAAGTTAAAC
TTTCTCTACAATATACCTTTGGTGGCACAAACATTGTTAATCATCCTTCA
GATTGTCCTTCGTTGTTCTCATATTCCTCTATAATATTTTAAATCCATCT
CTTGGAATGGTTACATCCTAGAAGACTAATTCAAAGTGATAATAAGAGAC
AGAGTAAGTGCTCTTCATGGAGGAGACAAACTTTGTTAGTCACTGTGTTG
AACTGTGCATCGAACCTGAGGGTTTAAATTGTGATGACTGCTGCTAGGAA
AGTGACTTAGAGTTGAAGAAGACTGGCAAAGATTTTGGGTGATTTTTCTG
CTTAATCAAAGGAGTTTCTCAGAGTTTATTAGTAGAACACCAAACCCAAA
GAGGGCCACATGCACACTTATAGTGGACAAAGATTTTTTTTTTGGCACAG
AAGACATTTTGCAGAACTTCTACAGTTGAACCTCATACACTTTTATTTAG
GATTATGTTCTTCCCACAATAAGAACACTTTGTCACATCTTTTTATAAAT
GTGTAGAT

Query= MSMg01no121_n08.b1 MSMg01no121_n08.b1 CHROMAT_FILE:
MSMg01no121_n08.b1 PHD_FILE: MSMg01no121_n08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:44 2005
         (605 letters)



>mm_chr6_74500160_74501164
          Length = 1005

 Score = 1123 bits (581), Expect = 0.0
 Identities = 596/601 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcactatgcgttatgcttcatatacagcatctcatttaatttttaaaattctcttc 64
           |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 205 gaattcactatgtgttatgcttcatatacagcatctcatttaattttcaaaattctcttc 264

                                                                       
Query: 65  aaatcgctgaccatgatgaccatagctgaagtgtgtttagtgacctaactagaacaataa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaatcgctgaccatgatgaccatagctgaagtgtgtttagtgacctaactagaacaataa 324

                                                                       
Query: 125 catgtgtaaattgataggttatgaagataaatattttacaaggcaacctgaggcaatttg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catgtgtaaattgataggttatgaagataaatattttacaaggcaacctgaggcaatttg 384

                                                                       
Query: 185 ccagtgatgacctgcctcctgagacatgagcaattccacagcaattttcttaatgttgga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccagtgatgacctgcctcctgagacatgagcaattccacagcaattttcttaatgttgga 444

                                                                       
Query: 245 aaagcacaagatggacagtagatttactggcgagaaatataatctctgtaatggcctttg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaagcacaagatggacagtagatttactggcgagaaatataatctctgtaatggcctttg 504

                                                                       
Query: 305 ttacattttgcagcttataccacatttctgtgagacaaatgtgactcacttagtttgtgg 364
           |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttacattttgcagcttataaaacatttctgtgagacaaatgtgactcacttagtttgtgg 564

                                                                       
Query: 365 tgaattctttagggtccatttgtcttcacgaatgtgtcagaaaagactgtaaaggcatca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgaattctttagggtccatttgtcttcacgaatgtgtcagaaaagactgtaaaggcatca 624

                                                                       
Query: 425 cggagtgtgttcctcaggggagttttatctgctctttaatacagtagccatttgtaaaat 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cggagtgtgttcctcaggggagttttatctgctctttaatacagtagccatttgtaaaat 684

                                                                       
Query: 485 gctgcaggagaaaaaataagtcagaagaaactcatcagggctaatgcaccttactttgaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gctgcaggagaaaaaataagtcagaagaaactcatcagggctaatgcaccttactttgaa 744

                                                                       
Query: 545 aaggcagtacaaatgaagcaagagaatgctttactgaatgttttctttcaggcctgaaga 604
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 745 aaggcagtacaaatgaagcaagagaatcctttactgaatgttttctttcaggcctgaaga 804

            
Query: 605 g 605
           |
Sbjct: 805 g 805


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space:   592025
Effective search space used:   592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no121_n08.g1 MSMg01no121_n08.g1 CHROMAT_FILE:
MSMg01no121_n08.g1 PHD_FILE: MSMg01no121_n08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:29:45 2005
         (289 letters)



>mm_chr6_74546677_74547365
          Length = 689

 Score =  495 bits (256), Expect = e-144
 Identities = 277/284 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgtcccttaaactcaaagttgagaacaaaaaggcaatgtcagatttgatcagagttccac 60
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 484 tgtcccttaaactcaaagttgagaacaaaaaggcaatgtcagctttgatcagagttccac 425

                                                                       
Query: 61  tctgaattgttaccttattcaggttatggtctgcacttccgttatgcctgaacacatgaa 120
           ||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 424 tctgaattgtttccttattcaggttacggtctgcacttctgttatgcctgaacacatgaa 365

                                                                       
Query: 121 gttaaactttctctacaatatacctttggtggcacaaacattgttaatcatccttcagat 180
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ggtaaactttctctacaatatacctttggtggcacaaacattgttaatcatccttcagat 305

                                                                       
Query: 181 tgtccttcgttgttctcatattcctctataatattttaaatccatctcttggaatggtta 240
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tgtccttcgttgttctcataatcctctataatattttaaatccatctcttggaatggtta 245

                                                       
Query: 241 catcctagaagactaattcaaagtgataataagagacagagtaa 284
           |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 244 catcctagaagactaattcaaagtgatagtaagagacagagtaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space:   190400
Effective search space used:   190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)