Query= MSMg01no122_b04.b1 MSMg01no122_b04.b1 CHROMAT_FILE:
MSMg01no122_b04.b1 PHD_FILE: MSMg01no122_b04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:08 2005
(678 letters)
>mm_chr6_5239356_5240433
Length = 1078
Score = 1303 bits (674), Expect = 0.0
Identities = 677/678 (99%)
Strand = Plus / Plus
Query: 1 tagcctctgagccatctttctagtgtccaaataaaaataataaaatcaaatattacatta 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 tagcctctgagccatctttctagtgtcaaaataaaaataataaaatcaaatattacatta 260
Query: 61 cttgaaatgtagccataaagaaaataaacagtatgtgagtacagatgcagtaaaaataca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgaaatgtagccataaagaaaataaacagtatgtgagtacagatgcagtaaaaataca 320
Query: 121 ttgaataaatgaaagttttaaaacaaatgtaatagaatataataaatcttactcccacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgaataaatgaaagttttaaaacaaatgtaatagaatataataaatcttactcccacat 380
Query: 181 gtccctagagcaatttaggaggcaaattacagtaagaagcataaataattgaagcagctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtccctagagcaatttaggaggcaaattacagtaagaagcataaataattgaagcagctg 440
Query: 241 tagcaaaaacagtacgaatacaaatgatgtcagtggttacagtgaataagggaaaaaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagcaaaaacagtacgaatacaaatgatgtcagtggttacagtgaataagggaaaaaata 500
Query: 301 gtaaaaatatctataatggtaatatatagtattatttaagtattactatatatattacct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtaaaaatatctataatggtaatatatagtattatttaagtattactatatatattacct 560
Query: 361 atataatactatagtaataaaaatatcgataatagtaatatgtagtattatttaaatatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atataatactatagtaataaaaatatcgataatagtaatatgtagtattatttaaatatt 620
Query: 421 actctatacattatccatacactactataatagcaaaaatatctatttggcacagggcta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 actctatacattatccatacactactataatagcaaaaatatctatttggcacagggcta 680
Query: 481 agttgactacagtttaatctgataatctcagagaacttactcaattcctcaactaacctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agttgactacagtttaatctgataatctcagagaacttactcaattcctcaactaacctc 740
Query: 541 atgaactgggtaccatcaaacctgtcctatgcacaataaaaccagctcagagagatagga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atgaactgggtaccatcaaacctgtcctatgcacaataaaaccagctcagagagatagga 800
Query: 601 gcaagtttccttgtaactgtttggcagtcttaactcgtctcctggtactcttctcctaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gcaagtttccttgtaactgtttggcagtcttaactcgtctcctggtactcttctcctaga 860
Query: 661 ggagtgaagaaacctggg 678
||||||||||||||||||
Sbjct: 861 ggagtgaagaaacctggg 878
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 678
Length of database: 1078
Length adjustment: 10
Effective length of query: 668
Effective length of database: 1068
Effective search space: 713424
Effective search space used: 713424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no122_b04.g1 MSMg01no122_b04.g1 CHROMAT_FILE:
MSMg01no122_b04.g1 PHD_FILE: MSMg01no122_b04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:30:08 2005
(317 letters)
>mm_chr6_5374583_5375299
Length = 717
Score = 588 bits (304), Expect = e-172
Identities = 313/316 (99%)
Strand = Plus / Minus
Query: 1 agtgatttctaccatttttactttttcctctcctttctgttttgttttttgtttgtttag 60
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 442 agtgatttctaccatttttactttttcttttcctttctgttttgttttttgtttgtttag 383
Query: 61 tagttaggttggggtttttgtaattctaatagtatgaaacaaggatttaccttgtaaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tagttaggttggggtttttgtaattctaatagtatgaaacaaggatttaccttgtaaccc 323
Query: 121 aggcctcaaatttacaatccccctacctctatttcttcaatgctggaccaataggagcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aggcctcaaatttacaatccccctacctctatttcttcaatgctggaccaataggagcat 263
Query: 181 gcccatcaccacttctgactgtcctcccatctctagaacttttcccagattgtcctcaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gcccatcaccacttctgactgtcctcccatctctagaacttttcccagattgtcctcaca 203
Query: 241 tatatatgtatgtatatatgtgtgtgtatacatatacatatatgtgtgtatgtcctatat 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 202 tatatatgtatgtatatatgtgtgtgtatacatatacatatatgtgtgtatgccctatat 143
Query: 301 gtttatatgtgtatat 316
||||||||||||||||
Sbjct: 142 gtttatatgtgtatat 127
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
