Query= MSMg01no124_b09.b1 MSMg01no124_b09.b1 CHROMAT_FILE:
MSMg01no124_b09.b1 PHD_FILE: MSMg01no124_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:42 2005
(361 letters)
>mm_chr6_140336587_140337347
Length = 761
Score = 690 bits (357), Expect = 0.0
Identities = 360/361 (99%)
Strand = Plus / Plus
Query: 1 tttctttgtgaacattctattaacagagacgggaagtttcactgaaatgcaacctggaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttctttgtgaacattctattaacagagacgggaagtttcactgaaatgcaacctggaaa 260
Query: 61 tttcatttttccttgcttttcttttataaatctataattataaaattgacttcaaaggat 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttatttttccttgcttttcttttataaatctataattataaaattgacttcaaaggat 320
Query: 121 aggtttttagactaacacttcataaattaactgcatttcatctttgccatatgccttatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggtttttagactaacacttcataaattaactgcatttcatctttgccatatgccttatt 380
Query: 181 attaaatataatttgcaattgtgacttcacataagataatgtcttacatctgaattgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attaaatataatttgcaattgtgacttcacataagataatgtcttacatctgaattgaaa 440
Query: 241 agtatttgctgaaaataaaaataataagtttaaaaagttctctcatacatatgtgtatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtatttgctgaaaataaaaataataagtttaaaaagttctctcatacatatgtgtatgt 500
Query: 301 gtgtgtatatgtgtgtgtatgtatatatgagtatatgtgtgtatgttcatgtatatatgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgtgtatatgtgtgtgtatgtatatatgagtatatgtgtgtatgttcatgtatatatgt 560
Query: 361 g 361
|
Sbjct: 561 g 561
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 761
Length adjustment: 9
Effective length of query: 352
Effective length of database: 752
Effective search space: 264704
Effective search space used: 264704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_b09.g1 MSMg01no124_b09.g1 CHROMAT_FILE:
MSMg01no124_b09.g1 PHD_FILE: MSMg01no124_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:42 2005
(330 letters)
>mm_chr6_140464200_140464928
Length = 729
Score = 613 bits (317), Expect = e-180
Identities = 326/331 (98%), Gaps = 5/331 (1%)
Strand = Plus / Minus
Query: 1 cacttcctaaattttctagctttgggcagaatcttaggtggaagctgaaaaattcaata- 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 cacttcctaaattttctagctttgggcagaatcttaggtggaagctgaaaaattcaataa 469
Query: 60 -cccttcagggaaaaaggaactgactcttaaagctgtcaagctaaataaaatgaacttga 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 g---ttcagggaaaaaggaactgactcttaaagctgtcaagctaaataaaatgaacttga 412
Query: 119 aaccctacttctatgcttccaaatatgtagtaaaatatactatactgctaaggcagcaac 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aaccctacttctatgcttccaaatatgtagtaaaatatactatactgctaaggcagcaac 352
Query: 179 ctagtccttaaatttggaatcttataacataaaatgttattcatataaaatatatacagt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ctagtccttaaatttggaatcttataacataaaatgttattcatataaaatatatacagt 292
Query: 239 aaattatctttatttgtcatataaaattgaagcaggacatattatttattaagaattatt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 aaattatctttatttgtcatataaaattgaagcaggacatattatttattaagaattatt 232
Query: 299 gcctttcccccatataaaacatctattctta 329
|||||||||||||||||||||||||||||||
Sbjct: 231 gcctttcccccatataaaacatctattctta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 729
Length adjustment: 9
Effective length of query: 321
Effective length of database: 720
Effective search space: 231120
Effective search space used: 231120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
