Query= MSMg01no124_c08.b1 MSMg01no124_c08.b1 CHROMAT_FILE:
MSMg01no124_c08.b1 PHD_FILE: MSMg01no124_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:51 2005
(358 letters)
>mm_chr6_56480813_56481571
Length = 759
Score = 646 bits (334), Expect = 0.0
Identities = 349/354 (98%), Gaps = 3/354 (0%)
Strand = Plus / Plus
Query: 7 attctcagtta-caagctctacacaagctcagcaaagcacctgctagccaggagagttca 65
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 attctcagttaacaagctctacacaagctcagcaaagcacctgctagccaggagagttca 266
Query: 66 agactctgaggtccctaaggaaccataatgattttttttt-aagccatggcatggcatga 124
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 267 agactctgaggtccctaaggaaccataatgattttttttttaagccatggcatggcatga 326
Query: 125 atgtttcttgatttgagagctcccttacatgtggaagctcaggaaatctaacagctgcca 184
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 atgtttcttgatttgggagctcccttacatgtggaagctcaggaaatctaacagctgcca 386
Query: 185 gtttcctaaaaccgttgtggacaagcttgaagccttatatgattattttttttcttcatg 244
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 387 gtttcctaaaaccgttgtggacaagcttgaagccttatatgattattttttt-cttcatg 445
Query: 245 ccaagtatgtttcattcaagggtagcatccccttaaagaatccttcacaagccaatgctc 304
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 446 ccaagtatgtttcattcaagggtagcatccccttaaagaatcctttacaagccaatgctc 505
Query: 305 ttccagtactactagaccccctcattaaccctctcaagtcttagtcttttcatc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ttccagtactactagaccccctcattaaccctctcaagtcttagtcttttcatc 559
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 759
Length adjustment: 9
Effective length of query: 349
Effective length of database: 750
Effective search space: 261750
Effective search space used: 261750
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no124_c08.g1 MSMg01no124_c08.g1 CHROMAT_FILE:
MSMg01no124_c08.g1 PHD_FILE: MSMg01no124_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:34:51 2005
(280 letters)
>mm_chr6_56652884_56653563
Length = 680
Score = 497 bits (257), Expect = e-145
Identities = 275/281 (97%), Gaps = 2/281 (0%)
Strand = Plus / Minus
Query: 1 gatgaagagtgataaagaaattgtcgggacacctt-taggatttgatgactttgtcagta 59
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 480 gatgaagagtgataaagaaattgtcgggaca-cttctaggatttgatgactttgtcagta 422
Query: 60 tcctttttaaaagcgggaatggtgtaggtttctaaagatgtattactataagtaagaact 119
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 421 tcctttttaaaagcgggaatggtgtaggtttctaaagatgtattaatataagaaagaact 362
Query: 120 atagacgaccgaagaatttctggttattacattaagaataattttgttttccaggaactt 179
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atagacaaccgaagaatttctggttattacattaagaataattttgttttccaggaactt 302
Query: 180 ggtagtattttaagaggtgtgtttgctgacagatgatagggctcttgccaacaacaaacc 239
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 301 ggtagtattttaagaggtgtgtttgctgacagttgatagggctcttgccaacaacaaacc 242
Query: 240 ttttgaatttgcactatcatagtgttgaacatattttaaac 280
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttttgaatttgcactatcatagtgttgaacatattttaaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
