Query= MSMg01no124_i23.b1 MSMg01no124_i23.b1 CHROMAT_FILE:
MSMg01no124_i23.b1 PHD_FILE: MSMg01no124_i23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:35:49 2005
(278 letters)
>mm_chr6_35717076_35717754
Length = 679
Score = 520 bits (269), Expect = e-152
Identities = 275/277 (99%), Gaps = 1/277 (0%)
Strand = Plus / Minus
Query: 1 tccagaataaagtaccctgaaaattcaataattgggaagaaaaatattttttatgcttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tccagaataaagtaccctgaaaattcaataattgggaagaaaaatattttttatgcttat 418
Query: 61 ggtctaatccaaatgttataaacaacatttaaggaatagtttaaaaatctaaaaattttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ggtctaatccaaatgttataaacaacatttaaggaatagtttaaaaatctaaaaattttc 358
Query: 121 ctcctgatgtatggagaaatgagtcatgaacacctgtgcacgcaatatgattaaaatttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ctcctgatgtatggagaaatgagtcatgaacacctgtgcacgcaatatgattaaaatttc 298
Query: 181 tgtacatatttctatattcagacaatgtgcatttatttagtatcaagcatgtgctggacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tgtacatatttctatattcagacaatgtgcatttatttagtatcaagcatgtgctggacc 238
Query: 241 ttacccccccccaaaaaaaa-tctgtcaggtctctaa 276
||||||||||| |||||||| ||||||||||||||||
Sbjct: 237 ttaccccccccaaaaaaaaaatctgtcaggtctctaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 679
Length adjustment: 9
Effective length of query: 269
Effective length of database: 670
Effective search space: 180230
Effective search space used: 180230
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no124_i23.g1 MSMg01no124_i23.g1 CHROMAT_FILE:
MSMg01no124_i23.g1 PHD_FILE: MSMg01no124_i23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:35:49 2005
(384 letters)
>mm_chr6_35578207_35578990
Length = 784
Score = 712 bits (368), Expect = 0.0
Identities = 380/384 (98%)
Strand = Plus / Plus
Query: 1 tgttcctctgtgattctctgatggtagggaggagaagatgctttgctgcaggaatcattc 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 tgttcctctgtgattctctgatggttgggaggagaagatgctttgctgcaggaatcattc 260
Query: 61 aaagctctcaggtgacatcttctgggaagaagtgcctgcagtggtctgggtaccatctta 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 aaagctctcaggtgacatcttctgggaagaactgcctgcagtggtctgggtaccatctta 320
Query: 121 gctttccatgtcaacagaaagctggcctgtcttttgagctaggttgtataccttaggcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctttccatgtcaacagaaagctggcctgtcttttgagctaggttgtataccttaggcat 380
Query: 181 aatctaagtaaagtctattcactgttgattggtactaatcaatggcatccctgtgaggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatctaagtaaagtctattcactgttgattggtactaatcaatggcatccctgtgaggtt 440
Query: 241 catattataaccttgaacttcagaacttgaactcttggttgtctgtagagaagactgtgg 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 catattataaccttgaacttcagaacttgaactcttggttgtatgtagagaagactgtgg 500
Query: 301 gtaagagttgtccaagtttattaaaaagtagatggaggtctttggcatttctggatccac 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtaagagttgtccaagtttattaaaaagtagatggaggtctttggcatttctggatccat 560
Query: 361 tattttttgtatcaattttaaaac 384
||||||||||||||||||||||||
Sbjct: 561 tattttttgtatcaattttaaaac 584
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
