Query= MSMg01no125_j04.b1 MSMg01no125_j04.b1 CHROMAT_FILE:
MSMg01no125_j04.b1 PHD_FILE: MSMg01no125_j04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:39 2005
(628 letters)
>mm_chr6_114758620_114759648
Length = 1029
Score = 1172 bits (606), Expect = 0.0
Identities = 621/626 (99%), Gaps = 1/626 (0%)
Strand = Plus / Minus
Query: 4 gaattcaacccactgtcgctttggattgtcacagagtggacattcaagaccaagtaggct 63
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gaattcaacccactgaagctttggattgtcacagagtggacattcaagaccaagtaggct 630
Query: 64 tctgtgacactcctgaaatagcccagaatgtcaggacccaggatggatatgtgtatgtga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tctgtgacactcctgaaatagcccagaatgtcaggacccaggatggatatgtgtatgtga 570
Query: 124 cataaaggtacaaaaataagctgaggtcagagaaaaaataatcacctgctagcctggggt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 cataaaggtacaaaaataagctgaggtcagagaaaaaataatcacctgctagcctggggt 510
Query: 184 gaacaacagacacaggccaagctggagtctccaagaacatgctatctttgctttgaccta 243
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gaacaacagacacaggcaaagctggagtctccaagaacatgctatctttgctttgaccta 450
Query: 244 ggaaagggtgaaggaattcatttctgccacagggacatttttgtgacattttgttgttgc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 ggaaagggtgaaggaattcatttctgccacagggacatttttgtgacattttgttgttgc 390
Query: 304 caaggtacaaccaaaacataccaataactctctaacaaaggacttttatttggaaacaga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 caaggtacaaccaaaacataccaataactctctaacaaaggacttttatttggaaacaga 330
Query: 364 gactatgactgcagtccagacaccaacccagggtgaagaaatctgtggc-tttgtaagga 422
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 329 gactatgactgcagtccagacaccaacccagggtgaagaaatctgtggcttttttaagga 270
Query: 423 tagaggaagcatgcagttagttagtggcacttcaggtactttaaggaggtctgactggca 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tagaggaagcatgcagttagttagtggcacttcaggtactttaaggaggtctgactggca 210
Query: 483 atgactatggagcgcagtggtagaacggcctagcctgtgtgttcctagattctattccta 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 atgactatggagcgcagtggtagaacggcctagcctgtgtgttcctagattctattccta 150
Query: 543 gcactggtaggtataggtatttgtcttaaggtcactatggttttgtcatcaattgctaac 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 gcactggtaggtataggtatttgtcttaaggtcactatggttttgtcatcaattgctaac 90
Query: 603 tacagtcttaaaagtagggctagtag 628
||||||||||||||||||||||||||
Sbjct: 89 tacagtcttaaaagtagggctagtag 64
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1029
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1019
Effective search space: 629742
Effective search space used: 629742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no125_j04.g1 MSMg01no125_j04.g1 CHROMAT_FILE:
MSMg01no125_j04.g1 PHD_FILE: MSMg01no125_j04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:37:39 2005
(109 letters)
>mm_chr6_114601340_114601848
Length = 509
Score = 195 bits (101), Expect = 5e-55
Identities = 107/109 (98%)
Strand = Plus / Plus
Query: 1 gatacctgggtgaatgtcgggcaggaatgttccatgctgtgcaggagccactggaggatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gatacctgggtgaatgtcgggcaggaatgttccatgctgtgcaggagccactggaggatc 260
Query: 61 tgtaattgttgtggaagcaaaacagcttcctttcttttttctttaattt 109
|| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggaattggtgtggaagcaaaacagcttcctttcttttttctttaattt 309
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 109
Length of database: 509
Length adjustment: 8
Effective length of query: 101
Effective length of database: 501
Effective search space: 50601
Effective search space used: 50601
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
