Query= MSMg01no126_e22.b1 MSMg01no126_e22.b1 CHROMAT_FILE:
MSMg01no126_e22.b1 PHD_FILE: MSMg01no126_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:38 2005
(494 letters)
>mm_chr6_10449848_10450740
Length = 893
Score = 868 bits (449), Expect = 0.0
Identities = 484/497 (97%), Gaps = 5/497 (1%)
Strand = Plus / Minus
Query: 1 acctcctatctcttacctaatggttttgtcaa-acatacatagaagatgttaaaaaataa 59
||||||||| | |||||||||||||||||||| |||||||||| |||||||||||| |||
Sbjct: 627 acctcctatatattacctaatggttttgtcaacacatacatagtagatgttaaaaagtaa 568
Query: 60 ttgagctttttgtaaactcagaattcccatttagctgtgtttctcagcaaaatttatgct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ttgagctttttgtaaactcagaattcccatttagctgtgtttctcagcaaaatttatgct 508
Query: 120 acagatagggtccataattattttcaaagagattcaaactcttcctcatgacttctagaa 179
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 acagatggggtccataattattttcaaagagattcaaactcttcctcatgacttctagaa 448
Query: 180 atttttattgttacaatgcctacaaaaaaaatgtcacctgcaactgtaattgattatttt 239
||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 447 atttttattgttacaatgcctac--aaaaaatgtcacctgcaattgtaattgattatttt 390
Query: 240 tgagaaattaaactgatttacatatttttctgtaatatgagaaatcttcagtgcatctag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tgagaaattaaactgatttacatatttttctgtaatatgagaaatcttcagtgcatctag 330
Query: 300 tgactattatttccccccctccacaaaatttccttacttgtgtattaaagatacagtcaa 359
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tgactattattttcccccctccacaaaatttccttacttgtgtattaaagatacagtcaa 270
Query: 360 atttacactaatgatacttcaacttgtactctcttatgtaacttggtatcttttttaagg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 atttacactaatgatacttcaacttgtactctcttatgtaacttggtatcttttttaagg 210
Query: 420 gatgggagcagagttcattaggcttacatttccacattgc--ttttcattactgaaggaa 477
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 209 gatgggagcagagttcattaggcttacatttccacattgcttttttcattactgaaggaa 150
Query: 478 gtcaggagaggaacaca 494
||||||||| |||||||
Sbjct: 149 gtcaggagatgaacaca 133
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 893
Length adjustment: 10
Effective length of query: 484
Effective length of database: 883
Effective search space: 427372
Effective search space used: 427372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no126_e22.g1 MSMg01no126_e22.g1 CHROMAT_FILE:
MSMg01no126_e22.g1 PHD_FILE: MSMg01no126_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:38 2005
(606 letters)
>mm_chr6_10298070_10299075
Length = 1006
Score = 1172 bits (606), Expect = 0.0
Identities = 606/606 (100%)
Strand = Plus / Plus
Query: 1 ataaaaaaaggacaacagatcctgtttgttttcaaggtctctcccattggcacatgaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataaaaaaaggacaacagatcctgtttgttttcaaggtctctcccattggcacatgaagc 260
Query: 61 taggaaagctggttacagctaatataaggagctttaggggactttcaggagaagaattta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taggaaagctggttacagctaatataaggagctttaggggactttcaggagaagaattta 320
Query: 121 gtttcactgatctttactcttccttacactcccacgtgtaagaaaaatttaggtacatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttcactgatctttactcttccttacactcccacgtgtaagaaaaatttaggtacatat 380
Query: 181 taagcttaatgttttatcaaatgccttgaatcttacttatttaaatggtccaatgacaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taagcttaatgttttatcaaatgccttgaatcttacttatttaaatggtccaatgacaaa 440
Query: 241 aagatattaagtgtggaagtcaatgcctattgtaaaatcctctgcaaccaatgaactgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagatattaagtgtggaagtcaatgcctattgtaaaatcctctgcaaccaatgaactgta 500
Query: 301 gcaatcaagtttcgaaattcatttaagcgtaaaatgcaaagtttgactactttaacctat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcaatcaagtttcgaaattcatttaagcgtaaaatgcaaagtttgactactttaacctat 560
Query: 361 gtggagcagtttgccttttgttttttcctttgttatagtgagatagtgacaaaatggtac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtggagcagtttgccttttgttttttcctttgttatagtgagatagtgacaaaatggtac 620
Query: 421 aatataacagttcacttagtttctgtgtgaaccatacatttaacatcctcgatgaaaagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatataacagttcacttagtttctgtgtgaaccatacatttaacatcctcgatgaaaagc 680
Query: 481 agttctattaaactaatggcttttctcctacttccaaatgtcttcgtttcctacaatgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agttctattaaactaatggcttttctcctacttccaaatgtcttcgtttcctacaatgaa 740
Query: 541 tttctaagaatacctttatgcttctaagttgctatacattaaggatcatttcttttattt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttctaagaatacctttatgcttctaagttgctatacattaaggatcatttcttttattt 800
Query: 601 acccac 606
||||||
Sbjct: 801 acccac 806
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
