Query= MSMg01no126_i06.b1 MSMg01no126_i06.b1 CHROMAT_FILE:
MSMg01no126_i06.b1 PHD_FILE: MSMg01no126_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:56 2005
(464 letters)
>mm_chr6_49091831_49092694
Length = 864
Score = 862 bits (446), Expect = 0.0
Identities = 459/464 (98%), Gaps = 2/464 (0%)
Strand = Plus / Plus
Query: 1 gcatggtggcacaaacctctaattcttgaatttgacaagctttgacatgaggactgggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcatggtggcacaaacctctaattcttgaatttgacaagctttgacatgaggactgggat 260
Query: 61 tcaggaactggactatatagtaagaccttaactcaaggtctaaaaaccctaaacatcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaggaactggactatatagtaagaccttaactcaaggtctaaaaaccctaaacatcaaa 320
Query: 121 caactcagaagccgctaacttagtccttaacaactagcaaagcaaacccactgcccggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caactcagaagccgctaacttagtccttaacaactagcaaagcaaacccactgcccggga 380
Query: 181 aaggggatggtagggagcagaggcaaagcctaatcgtggggtgggtgtctcagtggcaga 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 aaggggatggtagggagcagaggcaaagcctaatcgtgcggtgggtgtctcagtggcaga 440
Query: 241 gaacttgcctggcatgtgtggggccctgagtgcacccctagattggccaagggaagagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaacttgcctggcatgtgtggggccctgagtgcacccctagattggccaagggaagagaa 500
Query: 301 agaagttcagttttataatccttacataactctgggtaaaatctctgttccgcataccca 360
|||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 501 agaagttcagtt--ataatccttacataactctgggtaaaatctctgttctgtataccca 558
Query: 361 gtgaaattctgttggagaaagcaatttttcatttgcaagcagttatcagttgcatatagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gtgaaattctgttggagaaagcaatttttcatttgcaagcagttatcagttgcatatagc 618
Query: 421 ttctaggttaggggtggggggcttgtattcacttccgctctcgg 464
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ttctaggttaggggtggggggcttgtattcacttccgctctcgg 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no126_i06.g1 MSMg01no126_i06.g1 CHROMAT_FILE:
MSMg01no126_i06.g1 PHD_FILE: MSMg01no126_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:38:56 2005
(264 letters)
>mm_chr6_49214740_49215403
Length = 664
Score = 491 bits (254), Expect = e-143
Identities = 260/262 (99%)
Strand = Plus / Minus
Query: 1 cattatttgtgctggtgttccttatttttctagagcaagaagtatggatactaatgttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cattatttgtgctggtgttccttatttttctagagcaagaagtatggatactaatgttgc 243
Query: 61 caaacaatatattcccccaatttatttttatttatttacatgttctacagtgttgaggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 caaacaatatattcccccaatttatttttatttatttacatgttctacagtgttgaggac 183
Query: 121 taaacccagagcctagtacatgctaggtgtgctggataattttctatcaacttggcacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 taaacccagagcctagtacatgctaggtgtgctggataattttctatcaacttggcacag 123
Query: 181 ataaagtcacctgagaggagggaacttcaattataatgccccccgctgtggtgggagctc 240
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 122 ataaggtcacctgagaggagggaacttcaattaaaatgccccccgctgtggtgggagctc 63
Query: 241 atgcctttattcccagaacttg 262
||||||||||||||||||||||
Sbjct: 62 atgcctttattcccagaacttg 41
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 264
Length of database: 664
Length adjustment: 9
Effective length of query: 255
Effective length of database: 655
Effective search space: 167025
Effective search space used: 167025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
