Query= MSMg01no128_b10.b1 MSMg01no128_b10.b1 CHROMAT_FILE:
MSMg01no128_b10.b1 PHD_FILE: MSMg01no128_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:04 2005
(273 letters)
>mm_chr6_53688215_53688886
Length = 672
Score = 480 bits (248), Expect = e-140
Identities = 263/268 (98%), Gaps = 1/268 (0%)
Strand = Plus / Minus
Query: 6 gaattccttgtgtttacaaggcccatctcttttgtttctaacctagaggctttgaaagaa 65
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gaattccttgtgtatagaaggcccatctcttttgtttctaacctagaggctttgaaagaa 413
Query: 66 gaaacaaataacaggctgagtggtgggggacctaagggaagggaaaggaccttttaagct 125
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 gaaacaaataacagggtgagtggtgggggacctaagggaagggaaaggaccttttaagct 353
Query: 126 ctctttgtttgcatgggcttgagtgtctgtatattcaggaggctattggcgaccactggg 185
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 352 ctctttgtttgcatgggcttgagtgtctgtatattcaggaggctattgg-gaccactggg 294
Query: 186 taaacacttcttgagtgtcttgctggaaatccattgcttgaaaccatctgccttgagaat 245
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 293 taaacacttcttgagtgtcttgctggaaatccattgcttgaaaccatctgtcttgagaat 234
Query: 246 caggggacagaaagagaatcacaaagtg 273
||||||||||||||||||||||||||||
Sbjct: 233 caggggacagaaagagaatcacaaagtg 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 672
Length adjustment: 9
Effective length of query: 264
Effective length of database: 663
Effective search space: 175032
Effective search space used: 175032
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no128_b10.g1 MSMg01no128_b10.g1 CHROMAT_FILE:
MSMg01no128_b10.g1 PHD_FILE: MSMg01no128_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:04 2005
(199 letters)
>mm_chr6_53546002_53546600
Length = 599
Score = 362 bits (187), Expect = e-104
Identities = 196/199 (98%)
Strand = Plus / Plus
Query: 1 tctggttaaacacctaaaagccacaggcaggggcagctctttatcagcacagactcttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 tctggttaaacacctaaaagccacaggcaggggcagctctttatcagcagagactcttgc 260
Query: 61 ttgaaattaggccatctgggacaaggaggctgcatgccttcattgaagctgcctttccta 120
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 ttgaaactaggccatctgggacaaggaggctgcatgccttccttgaagctgcctttccta 320
Query: 121 gggctgaatatgaactcctgagtcgcatttttcaaagaggggaaacactgtttatttccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggctgaatatgaactcctgagtcgcatttttcaaagaggggaaacactgtttatttccc 380
Query: 181 atctgtctttaggatctta 199
|||||||||||||||||||
Sbjct: 381 atctgtctttaggatctta 399
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 599
Length adjustment: 8
Effective length of query: 191
Effective length of database: 591
Effective search space: 112881
Effective search space used: 112881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
