Query= MSMg01no128_e03.b1 MSMg01no128_e03.b1 CHROMAT_FILE:
MSMg01no128_e03.b1 PHD_FILE: MSMg01no128_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:17 2005
(249 letters)
>mm_chr6_51964547_51965195
Length = 649
Score = 470 bits (243), Expect = e-137
Identities = 246/247 (99%)
Strand = Plus / Minus
Query: 1 ttttttctaataacttatcacattgctcatctgggtagggactttggattccattttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttttttctaataacttatcacattgctcatctgggtagggactttggattccattttgat 388
Query: 61 taaacagacactttggagatgtcttttttgttattattatgcatgttttacttattaagc 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 387 taaacagacactttggagatgtcttttttgttatcattatgcatgttttacttattaagc 328
Query: 121 ttttgtttttgctgttttgtaagatataggtacctatagatttcaattttcctttttaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttttgtttttgctgttttgtaagatataggtacctatagatttcaattttcctttttaaa 268
Query: 181 atcaatgttttatatcatctctttgagaatgacataaatgtcatagtacaatctgaaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atcaatgttttatatcatctctttgagaatgacataaatgtcatagtacaatctgaaaaa 208
Query: 241 cacaggt 247
|||||||
Sbjct: 207 cacaggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no128_e03.g1 MSMg01no128_e03.g1 CHROMAT_FILE:
MSMg01no128_e03.g1 PHD_FILE: MSMg01no128_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:17 2005
(264 letters)
>mm_chr6_51824164_51824826
Length = 663
Score = 495 bits (256), Expect = e-144
Identities = 262/264 (99%), Gaps = 1/264 (0%)
Strand = Plus / Plus
Query: 1 caactggcatttttcccttgtgttgtaaatttaaatgcaggagaactgacgctgtgtatt 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 caactggcatttttcccttgtgttgtaaatttaaatgcaggagaactga-gctgtgtatt 259
Query: 61 tcccgttgacagctgtcatttgtggggtggggtggggggtaactttcttaccttgctaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tcccgttgacagctgtcatttgtggggtggggtggggggtaactttcttaccttgctaag 319
Query: 121 aatgtaaatcacatcaccacgcttaaaggacaactcatcagacagagctccagtgcagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aatgtaaatcacatcaccacgcttaaaggacaactcatcagacagagctccagtgcagtc 379
Query: 181 ccacagaccctggtaaaaattagcgtaatcagtgcttttatctcctaggaaaaagagaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ccacagaccctggtaaaaattagcgtaatcagtgcttttatctcctaggaaaaagagaga 439
Query: 241 gagacttggtgttaaggcttgaat 264
||||||||| ||||||||||||||
Sbjct: 440 gagacttggggttaaggcttgaat 463
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 264
Length of database: 663
Length adjustment: 9
Effective length of query: 255
Effective length of database: 654
Effective search space: 166770
Effective search space used: 166770
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
