Query= MSMg01no128_e10.b1 MSMg01no128_e10.b1 CHROMAT_FILE:
MSMg01no128_e10.b1 PHD_FILE: MSMg01no128_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:19 2005
(280 letters)
>mm_chr6_89234405_89235085
Length = 681
Score = 435 bits (225), Expect = e-126
Identities = 264/277 (95%), Gaps = 1/277 (0%)
Strand = Plus / Minus
Query: 5 gaattctttctttctccg-acaggactaattttccttcctttgttgttatagaaggtgat 63
|||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||
Sbjct: 481 gaattctttctttctctgcacaggactaattttccttcctttgttgttacagaaggtgat 422
Query: 64 tttcttactgagccccatctgctctcacccttgtggcacaggtggccttctcctgccacc 123
|||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 421 tttcttacagagaagcatctgctctcacccttgtggcacaggtggccttctcctgccatc 362
Query: 124 aagtccagaggaatgcatgctgcctgggcttagtggaacgtcctagtcccttctattcct 183
|||||||||||||||||||||||| |||||||| |||| |||| |||||||||||||||
Sbjct: 361 aagtccagaggaatgcatgctgccggggcttagcagaacttcctcgtcccttctattcct 302
Query: 184 gtggcagtgggctcagaggactcaggctggggagtgagaaactcccagaatgaagcctcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtggcagtgggctcagaggactcaggctggggagtgagaaactcccagaatgaagcctcc 242
Query: 244 tcacaggtgagagagctagagaggccatatctgcttc 280
|||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcacaggtgagagagctagagaggccatatctgcttc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 681
Length adjustment: 9
Effective length of query: 271
Effective length of database: 672
Effective search space: 182112
Effective search space used: 182112
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no128_e10.g1 MSMg01no128_e10.g1 CHROMAT_FILE:
MSMg01no128_e10.g1 PHD_FILE: MSMg01no128_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:19 2005
(284 letters)
>mm_chr6_89104103_89104786
Length = 684
Score = 480 bits (248), Expect = e-140
Identities = 275/284 (96%)
Strand = Plus / Plus
Query: 1 caggtaatacggcctcaagaagtaacttgataaacaacagaagtaaatttcacttttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggtaatacggcctcaagaagtaacttgataaacaacagaagtaaatttcacttttctt 260
Query: 61 tgcttgaggggaaatttttctctggaggttatttataagaaagttttggaaattagccca 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtttgaggggaaatttttctctggaggttatttataagaaagttttggaaattagccca 320
Query: 121 taaagctgtttgtagttggtatgtttgaggaatagcaagaagctatacatcttattcttt 180
||||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||
Sbjct: 321 taaagctgtttgtagttgggatgtttgaggaatagtaagaagctatacatcttagtcttt 380
Query: 181 gtctacttgatacatcccagagtcacttataaaaaggaaacctcaattgagaaattggcc 240
||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 gtcaacttgatacaacccagagtcacttagaaaaaggaaacctcaattgagaaattggcc 440
Query: 241 tgtacgcatgtctgtggcgcatttttttgattaatgattgatgt 284
|||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 tgtaggcatgtctgtggggcatttttttgattaatgattgatgt 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
