Query= MSMg01no128_i12.b1 MSMg01no128_i12.b1 CHROMAT_FILE:
MSMg01no128_i12.b1 PHD_FILE: MSMg01no128_i12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:39 2005
(183 letters)
>mm_chr6_144157901_144158484
Length = 584
Score = 255 bits (132), Expect = 9e-73
Identities = 153/162 (94%), Gaps = 5/162 (3%)
Strand = Plus / Minus
Query: 1 cgcccggaggttgtctaatgcctagcagtcagagtgtgcggctgt---gttagcccgagt 57
|||| |||||||||||||||||||||||||||||||||||||||| | || ||||
Sbjct: 316 cgcctggaggttgtctaatgcctagcagtcagagtgtgcggctgtgcag--agggggagt 259
Query: 58 agccagaccgctgctggaagtgtactacccctttaagagaatggtcaaggagtcctagga 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 agccagaccgctgctggaagtgtactacccctttaagagaatggtcaaggagtcctagga 199
Query: 118 gagagagagagagagagagagagagagagagagagagagaga 159
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gagagagagagagagagagagagagagagagagagagagaga 157
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 67
Number of extensions: 31
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 1
Length of query: 183
Length of database: 584
Length adjustment: 8
Effective length of query: 175
Effective length of database: 576
Effective search space: 100800
Effective search space used: 100800
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no128_i12.g1 MSMg01no128_i12.g1 CHROMAT_FILE:
MSMg01no128_i12.g1 PHD_FILE: MSMg01no128_i12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:39 2005
(325 letters)
>mm_chr6_144035270_144035994
Length = 725
Score = 605 bits (313), Expect = e-177
Identities = 322/325 (99%)
Strand = Plus / Plus
Query: 1 tagaacctaaatcaaagcagacacgggagaacagacatcggaatcctagcacacgtctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagaacctaaatcaaagcagacacgggagaacagacatcggaatcctagcacacgtctag 260
Query: 61 ggacagatagaaaaagctgagacagtagatgctccaggagatcaagggccagctagcatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggacagatagaaaaagctgagacagtagatgctccaggagatcaagggccagctagcatg 320
Query: 121 gcctgcaaagcagcaaagaggcactggctcaaggagtgtaaaactgtgggaaggtgataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcctgcaaagcagcaaagaggcactggctcaaggagtgtaaaactgtgggaaggtgataa 380
Query: 181 tcaataaccaaagactatttcctgacatctccatttatgccttggtgcatgcatgtgctc 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 tcaataaccaaagactatttcctgacatctccatttatgccctggtgcatgcatgtgctc 440
Query: 241 acacgctctctcacacacacggacacacagacacacacaaacatacacacatacacacac 300
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 441 gcacgctctctcacacacacggacacacagacacacacaaacatacacacacacacacac 500
Query: 301 acatatacagacacacacacataca 325
|||||||||||||||||||||||||
Sbjct: 501 acatatacagacacacacacataca 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
