NTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCGCGGAA
TTCACATTGTACGGCTGGAGATAAGGCTTAGCCTTTGCAGCAAGCACTCT
TCTTGCAGAGGACCCTCATTCAGTTCAGAGCACCCATGGTAGGGTTAACT
CCCAGCCTTCTGTAACTTCAGATTTAGCATCTAACTCCCTCTCCTTGTCT
CCCTAGACACATATTTTAGTTAAGGATTCTAATGCCGTGACAAACTGCCA
TAACCAAAAAGCAAGATAGGGAAGAAATGTTACATTTGGCTTATACTTAC
ATATTGCGGTTCATCACTGAAGAAAGTCAGGATAGGACTTCCAACAGGGC
AGGAACCTGGATGGCAGGACTGATGTAGAGGCCACTGTAGGATGCTGCAT
ACTGTCCTGCTATCCCTGGTCTACTTTCTTACAGTATCTAGGATCACCTG
TGCAGGGATGGCCCAATGCACAGTGGGCCCGACCCTCCCTCATTGATCAC
TAATTGAGATAATGCCTTTCAGATGTCTCTCATGAAGACATTTCCTAAAC
TGAGAGTCCCTTTTCTCTGATGATTCCAGCTTTCTTCAACTTGACACAAA
GCAAGCTACTAATTACCTGTACTCAGATGTGCACATATATAGCTCCAATA
TACATAAATATACACAAATAAACGAATCGTCAGAAGAAATACCCAGAAAG
ATGG

TGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCCATATAGAATCTCTTGCCTTATTTAGAAGT
CACATTACTTAAAATCCCCCACTTAAGATTTTTTAAACAATGTTATTTCT
TTCATTCCAGTGAGATGACTATATGAGTAAAGGCACTTGCTATGAAGCCT
GACAACTTCAGAGTCCCAGGATTCATGTGGAGGAAGGAGAGAACCAATTC
CCACATATTATTCTCTGTCATCCATATGCACCTTGGTACACGTGCCCACA
TAGATATATACACACATTTCCATGAAATATATAAATGAAAATTTTAAAAT
AAAATTAAACACTCATTTATTTACTTATTTATTTATTTGATTTAAAGGCA
GGGTCTACCGCAGTTCAGGCTCACCTCAAACTTTCTGTGTGGTCATGAAT
AAATGTGATTATCACAATACCCAATGTGCTATCAAAAAAGGAACCCAGAT
ATTTATGTGTGCGTCAAGCCTCTATCAACTGAACTATAGCTCCAGGTGCC
CAGATTTTTCTTTATTCTTGTTAAATGCAAGTGCTTTGTAAATAACACTT
TACTGCACTTTCAACTAATATTCAAATAGGAATCATGGCTCTAAGTAACT
ACAATTAGGAGACCACTGGTTTTAGACTTCTTATACTACATGTGAAAG

Query= MSMg01no128_n13.g1 MSMg01no128_n13.g1 CHROMAT_FILE:
MSMg01no128_n13.g1 PHD_FILE: MSMg01no128_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:04 2005
         (545 letters)



>mm_chr6_78535340_78536283
          Length = 944

 Score =  603 bits (312), Expect = e-177
 Identities = 343/358 (95%), Gaps = 9/358 (2%)
 Strand = Plus / Minus

                                                                       
Query: 196 ctgtcatccatatgcaccttggtacacgtgcccacatagatatatacacacatttccatg 255
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944 ctgtcattcatatgcaccttggtacacgtgcccacatagatatatacacacatttccatg 885

                                                                       
Query: 256 aaatatataaatgaaaattttaaaataaaattaaacactcatttatttacttatttattt 315
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 aaatatataaatggaaattttaaaataaaattaaacactcatttatttacttatttattt 825

                                                                       
Query: 316 atttgatttaaaggcagggtctaccgcagttcaggctcacctcaaactttctgtgtggtc 375
           |||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||
Sbjct: 824 atttgatttaaaggcagggtctagtgtagttcaggctcacctcaaactttctgtgtggtc 765

                                                                       
Query: 376 atgaataaatgt--------gattatcacaatacccaatgtgctatcaaaaaaggaaccc 427
           ||||||||||||        ||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 atgaataaatgtgagtgctagattatcacaatacccaatgtgctatcaaaaaaggaaccc 705

                                                                       
Query: 428 agatatttatgtgtgcgtcaagcctctatcaactgaactatagctccaggtgcccagatt 487
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 704 agatatttatgtgtgcgtcaagcctctatcaactgaactatagctccaggtgcccaga-t 646

                                                                     
Query: 488 tttctttattcttgttaaatgcaagtgctttgtaaataacactttactgcactttcaa 545
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 645 tttctttattcttgttaaatgcaactgctttgtaaataacactttactgcactttcaa 588


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 944
Length adjustment: 10
Effective length of query: 535
Effective length of database: 934
Effective search space:   499690
Effective search space used:   499690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)