Query= MSMg01no128_p10.b1 MSMg01no128_p10.b1 CHROMAT_FILE:
MSMg01no128_p10.b1 PHD_FILE: MSMg01no128_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:13 2005
(696 letters)
>mm_chr6_94383492_94384587
Length = 1096
Score = 1191 bits (616), Expect = 0.0
Identities = 664/680 (97%), Gaps = 1/680 (0%)
Strand = Plus / Plus
Query: 17 gaattcaatgttgtctctatcaaaatttcaatgatattcttcataaaactagatatcaaa 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gaattcaatgttgtctctatcaaaatttcaatgatattcttcataaaactagatatcaaa 276
Query: 77 aatccccaaatccatatgtacagtggttacatttaactattaatttgacaggatttagta 136
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 277 aatccccaaattcatatgtacagtggttatatttaactattaatttgacaggatttagta 336
Query: 137 tcatgtaggagacaagctctgggcctgggtgtgcctgtggagggctctcctgagaggttt 196
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 337 tcatgaaggagacaagctctgggcctgggtgtacctgtggagggctctcctgagaggttt 396
Query: 197 aactaaaatataaagagcccacctgaacattgctgtgtgagactcagatctgctttggga 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 aactaaaatataaagagcccacctgaacattgctgtgtgagactcagatctgctttggga 456
Query: 257 ggggctgtggtctagatgtggcttgtcattgtatttatgtgttaggagcttggtccaggt 316
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 457 ggggctgtggtctagatgtggcttgtcattgtgtttatgtgttaggagcttggtccaggt 516
Query: 317 ggcagggttaggagctgatggaattttaaagagtaaagccagtgtcatgtccttgggtca 376
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gtcagggttaggagctgatagaattttaaagagtaaagccagtgtcatgtccttgggtca 576
Query: 377 gcatgggctcgctctcagaaggcattaaggtatttgtggttagttcttgaaaaaagactg 436
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gcatgggcttgctctcagaaggcattaaggtatttgtggttagttcttgaaaaaagactg 636
Query: 437 tgccaaaaacctgggttgggggctggagagatggcccagtggttaagagtactgactgct 496
||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 637 tgccaaaaacctgggttgggggctggagagatggctcagtggttaagagcactgactgct 696
Query: 497 cgtccagtaggtcatgagttcaattcctaaccaccacatggtggctcacaaccatctgca 556
||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 697 agtccagtagatcatgagttcaattcctaaccaccacatggtggctcacaatcatctgca 756
Query: 557 atgggatctgatgctctcttctggtctgtctgaagacagctatagtgtacttacaaataa 616
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 757 atgggatctgatgctctcttcaggtctgtctgaagacagctatagtgtacttacaaataa 816
Query: 617 ataaatctttattaaaaaaaaaaacctgggttggtcccattccagactctcttcctgttt 676
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 817 ataaatctttattaaaaaaaaaa-cctgggttggtcccattccagactctcttcctgttt 875
Query: 677 tgatattaagctatcatctg 696
||||||||||||| ||||||
Sbjct: 876 tgatattaagctaccatctg 895
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1096
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1086
Effective search space: 744996
Effective search space used: 744996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no128_p10.g1 MSMg01no128_p10.g1 CHROMAT_FILE:
MSMg01no128_p10.g1 PHD_FILE: MSMg01no128_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:13 2005
(653 letters)
>mm_chr6_94567843_94568895
Length = 1053
Score = 1224 bits (633), Expect = 0.0
Identities = 645/649 (99%)
Strand = Plus / Minus
Query: 1 cagattgcgagttgtggaagtcttttcaggatgagattgttttcttgtccacccagattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 cagattgcgagttgtggaagtcttttcaggatgagattgttttcttgtccacccagattg 790
Query: 61 cctgtgagagagagaggagatagaagggccattggctgtttgccctaagtcaggaaacag 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 cctgtgagagagaggggagatagaagggccattggctgtttgccctaagtcaggaaacag 730
Query: 121 taggttttgtctaaggctgaactgaccacaggggcccctggggccagaatctgtaatgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 taggttttgtctaaggctgaactgaccacaggggcccctggggccagaatctgtaatgaa 670
Query: 181 acaggacttaggaggcctcatggtgtgctctggcagggcccttgggggcaggtggatccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 acaggacttaggaggcctcatggtgtgctctggcagggcccttgggggcaggtggatccg 610
Query: 241 ccacctctgtctgtgttctttgcattgtaggaggctgttctgggatgcggggccgtgctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 ccacctctgtctgtgttctttgcattgtaggaggctgttctgggatgcggggccgtgctc 550
Query: 301 ctgcaggccagcctgtttctgccccgtgtcccttcagagccctgacagttagtctgaagc 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 549 ctgcaggccagcctgtttctgccccgtgtcccttcagagccttgacagttagtctgaagc 490
Query: 361 tcaggccacatggtgggtgatggcgaggccatggtcacaggcaggctagtacttgtcctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 489 tcaggccacatggtgggtgatggcgaggccatggtcacaggcaggctagtatttgtcttc 430
Query: 421 ccttgagggaatcagtctgacataggtggaagatagcctctagtccagatcttagccctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ccttgagggaatcagtctgacataggtggaagatagcctctagtccagatcttagccctg 370
Query: 481 cttctcctctctttgggaagaggtgagccaggctagctctgttcagaagcttcctctgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cttctcctctctttgggaagaggtgagccaggctagctctgttcagaagcttcctctgtc 310
Query: 541 cactgctgcctggacttgctggttctgatttcccaggcctccagcctatgtatgtaacat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 cactgctgcctggacttgctggttctgatttcccaggcctccagcctatgtatgtaacat 250
Query: 601 gcctgatagaaaatgctggaagacattaccctcgaggggcagagctcat 649
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gcctgatagaaaatgctggaagacattaccctcgaggggcagagctcat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
