NTTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTTGAGTTTCCAATTTAATTCCCAAGCATCACATGATAATTCG
ATATTCAGGATAGAACCAAACACAACAGAGAGCAGTATCTGATCTAGCTC
TGTTTCCCCTGTCGCCTGTAGGAGAGCAGCATGAAATGAGGAAGTTTGAA
AGTGAATGGGGATGCCCAGCGAGAGAAATTGATTCAGGTTGATCCTAAGA
GAATTGCTTCTGTGTTGTCACTGAAAATGTCTATAGCTTGCTGGTGGACT
TCCCCAAATTTGGTGTGCACATCTCATCTATTCACCTATTGTGAATAATC
TTTAGGAACATGACTGTACTGGTCCTTTAGAGAAAATAATATAGACATAT
TTTGAAGCCCGGTTGTACAGAATGACACTCATGAATTTTCATTTGTGTAG
TGTGGCAAAGCCTCTCCAGTCTTTACAGGACAAGAATAAATGAACTCTAT
GCTGGAAAGAGGGCTAGAAGGTTCTTGGTGGAATTCCACAATATCCTCAG
AGAGTGATTTGATAATGTTTGCTCTATATTTCTATAAATCACTTTCACTA
AGCAAAAGCAGTGACTATATTAAAATAACTGTGATTCTTGTATTTAAAAT
GGTTTTCAGGTAAGTGAATTTAATGTGCACATAAAACTATTATTTTCTTA
ATATA

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCCTCTGAAGAACAGACTGGGAGGAAGA
AGCAGCTCATTACCAGCCACATAAAGTGCTAGTTAATCGGTCAAGAAAAA
AGCCAAAAGCGGCTGGCGAAAGCCAGCATGCTGTTCAGCCTCCGGGCAGT
CGGCTTCAAGGTCCGCCCTATGCGGAGCCCCCGCCCTGCGTAGTGCATCA
GCCCTGCGCAGAGAGACAATGCGCAGAGAGACAATGCGCAGAGAGGCAAT
GCACAGACTCATTCATTCCCAGAGAGGAACAAAGGAAAATACAACAGGCA
TTTCCGGTCTTTGAAGCAGCCCACCCCGGGCGTGTCCACGCTCCGGTAGA
ATACGTGTAGATTACACAACTTGACGAGTCGGTCCGTAAATACGGAACCA
ATGCTAATTTTACCTTGGTGCAGTTAGACAGGCTTGCCGGCATGGCACTA
ACTCCTGCCGACTGGCAAACGATTGTAAAAGCCGCTCTCCCTAGTATGGG
CAAATATATGAAATGGAGAGCGCTTTGGCATGAGGCTGCACAAGCACAGG
CCCAAACAAACGCAGCTGCTTTGACTCCAGAGCAGAGAAATTGGACTTTT
GACTTGTTAACGGGTCAGGGAGCTTATTCTGCTGATCAGACAAACTACCA
T

Query= MSMg01no128_p21.b1 MSMg01no128_p21.b1 CHROMAT_FILE:
MSMg01no128_p21.b1 PHD_FILE: MSMg01no128_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:42:16 2005
         (658 letters)



>mm_chr6_20727312_20728369
          Length = 1058

 Score = 1156 bits (598), Expect = 0.0
 Identities = 640/654 (97%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttgagtttccaatttaattcccaagcatcacatgataattcgatattcaggat 64
           ||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 858 gaattctctgagtttctaatttaattcccaagcatcgcatgataattcgatattcaggat 799

                                                                       
Query: 65  agaaccaaacacaacagagagcagtatctgatctagctctgtttcccctgtcgcctgtag 124
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 798 agaaccaaacacaacagagagcagtatctgatcgagctctgtttcccctgtcgcctgtag 739

                                                                       
Query: 125 gagagcagcatgaaatgaggaagtttgaaagtgaatggggatgcccagcgagagaaattg 184
           |||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||
Sbjct: 738 gagagcagcatgaaatgaggaagtttgaaagtaaatggggatgcccagcaagggaaattg 679

                                                                       
Query: 185 attcaggttgatcctaagagaattgcttctgtgttgtcactgaaaatgtctatagcttgc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 attcaggttgatcctaagagaattgcttctgtgttgtcactgaaaatgtctatagcttgc 619

                                                                       
Query: 245 tggtggacttccccaaatttggtgtgcacatctcatctattcacctattgtgaataatct 304
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tgatggacttccccaaatttggtgtgcacatctcatctattcacctattgtgaataatct 559

                                                                       
Query: 305 ttaggaacatgactgtactggtcctttagagaaaataatatagacatattttgaagcccg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ttaggaacatgactgtactggtcctttagagaaaataatatagacatattttgaagcccg 499

                                                                       
Query: 365 gttgtacagaatgacactcatgaattttcatttgtgtagtgtggcaaagcctctccagtc 424
           |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 498 gttgtagagaatgacactcatgaattttcatttgtgtagtgtggcaaagcctctccggtc 439

                                                                       
Query: 425 tttacaggacaagaataaatgaactctatgctggaaagagggctagaaggttcttggtgg 484
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 cttacaggacaagaataaatgaactctatgctggaaagagggctagaaggttcttggtgg 379

                                                                       
Query: 485 aattccacaatatcctcagagagtgatttgataatgtttgctctatatttctataaatca 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aattccacaatatcctcagagagtgatttgataatgtttgctctatatttctataaatca 319

                                                                       
Query: 545 ctttcactaagcaaaagcagtgactatattaaaataactgtgattcttgtatttaaaatg 604
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 318 ctttcactaagcaaaagcagtgactatattaaaataattgtgattcttgtatttaaaatg 259

                                                                 
Query: 605 gttttcaggtaagtgaatttaatgtgcacataaaactattattttcttaatata 658
           ||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 258 gttttcaagtaagtgaatttaatgtgtacataaaactattattttcttaatata 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space:   679104
Effective search space used:   679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)