Query= MSMg01no131_a07.b1 MSMg01no131_a07.b1 CHROMAT_FILE:
MSMg01no131_a07.b1 PHD_FILE: MSMg01no131_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:05 2005
(640 letters)
>mm_chr6_56480166_56481201
Length = 1036
Score = 1180 bits (610), Expect = 0.0
Identities = 631/640 (98%), Gaps = 4/640 (0%)
Strand = Plus / Minus
Query: 1 tttctcttgtccctctgcacaccagccagtcccaggctatgcatgggcccacctctcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 836 tttctcttgtccctctgcacaccagccagtcccaggctatgcatgggcccagctctcatg 777
Query: 61 ggcaaggaagaaaacacatggaaaatgtattggtgagtcaattattataagactcatggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 ggcaaggaagaaaacacatggaaaatgtattggtgagtcaattattataagactcatggt 717
Query: 121 tctaatgttgcaggttaataggggacaacattattaagcaatagaagccatgacaggacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 tctaatgttgcaggttaataggggacaacattattaagcaatagaagccatgacaggacg 657
Query: 181 tgacaggacatcagctggctggtgatagcaggggctcagaccccttggtaaattgctggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 tgacaggacatcagctggctggtgatagcaggggctcagaccccttggtaaattgctggc 597
Query: 241 atcaatccctatagtcctgcattggatgaagaacatgggtgtggatgctcaagctttgcc 300
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 atcaatccccaaagtcctgcattggatgaagaacatgggtgtggatgctcaagctttgcc 537
Query: 301 cctggacagaggcacagacgactcttctgagcttccacatctggcacctgataggacaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 cctggacagaggcacagacgactcttctgagcttccacatctggcacctgataggacaaa 477
Query: 361 cagattcaggatgctacagggatgctcattatctcagtgtcaaagaagttgtctagtctt 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 476 cagattcaggatgctacagggatgctcattatctcagtgccaaagaagttgtctagtctt 417
Query: 421 agcttttagagaacctcaccaaataacctgcctgtatcttccatctacattagcaaaatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 agcttttagagaacctcaccaaataacctgcctgtatcttccatctacattagcaaaatc 357
Query: 481 tcctgggggacaactgcttgtgtaagtccatgtgtacaggctctcagacattaattagct 540
||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 356 tcctgggggacaactgcttgtgtaagtccatgtgtacaggccctcagacatta----gct 301
Query: 541 cctgcaaaccctgcttttttgaggtggtaaaatatgatgaaactactggaggggactctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cctgcaaaccctgcttttttgaggtggtaaaatatgatgaaactactggaggggactctt 241
Query: 601 atgaaatgccctttgatttttgtctcatccccttttctat 640
||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 atgaaatgccctttgatttttgtctcatccccttttctat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1036
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1026
Effective search space: 646380
Effective search space used: 646380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no131_a07.g1 MSMg01no131_a07.g1 CHROMAT_FILE:
MSMg01no131_a07.g1 PHD_FILE: MSMg01no131_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:06 2005
(237 letters)
>mm_chr6_56305208_56305844
Length = 637
Score = 426 bits (220), Expect = e-124
Identities = 232/236 (98%)
Strand = Plus / Plus
Query: 1 ttttggttgaattactctcaagctttgtcataattttactatgtagaaaaacttcacatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttggttgaattactctcaagctttgtcataattttactatgtagaaaaacttcacatc 260
Query: 61 gtactcattaaggttcattagtgttgtttaataacagctgtcaagaagactttaaataag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtactcattaaggttcattagtgttgtttaataacagctgtcaagaagactttaaataag 320
Query: 121 gaacactctccagtaaaagcctgaagaatgttaattccttacatagatttactattcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaacactctccagtaaaagcctgaagaatgttaattccttacatagatttactattcttt 380
Query: 181 ctccacaagtagcctttttttccctgcagaattcacctttcattacttatcaaatg 236
|||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctccacaagtagccctccattccctgcagaattcacctttcattacttatcaaatg 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
