Query= MSMg01no131_a24.b1 MSMg01no131_a24.b1 CHROMAT_FILE:
MSMg01no131_a24.b1 PHD_FILE: MSMg01no131_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:09 2005
(611 letters)
>mm_chr6_25955635_25956646
Length = 1012
Score = 1025 bits (530), Expect = 0.0
Identities = 601/642 (93%), Gaps = 31/642 (4%)
Strand = Plus / Plus
Query: 1 gctaggaggagagtcctctggggactgtgggatggtctgctgagtttgtgtccaaggtga 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gctaggaggagagacctctggggactgtgggatggtctgctgagtttgtgtccaaggtga 255
Query: 61 ccaggagctggtgcagactggaagaaacctgaggtgctggttgggtttgttttctgtccc 120
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 256 ccaggagctggtgcagactggaagaaacctgagctgctggttgggcttgttttctgtccc 315
Query: 121 tgttactgctggcacaggcccctcatgac---ttttttttttttttttttggaacagatg 177
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 316 tgttactgctggcacaggcccctcatgactttttttttttttttttttttggaacagatg 375
Query: 178 ttgcattccactcactagtgattttaagattctgggagtgctagggtgcctggggcatgg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ttgcattccactcactagtgattttaagattctgggagtgctagggtgcctggggcatgg 435
Query: 238 agaatcctctgtaaactgtgggacagtctgcagagttcatgcccaaggtggttctcctct 297
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 agaatcctctggaaactgtgggacagtctgcagagttcatgcccaaggtggttctcctct 495
Query: 298 ggtgccaacatgaaggcagct--tgttttgtatgctttaactatggccaccctgatatat 355
||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||
Sbjct: 496 ggtgccaacatgaaggcagcttctgttttgtatgctttaactatggccatcttgatatat 555
Query: 356 atcttatatgatgttattgttttgatttttatttctctcatgttaagtgatattggggtt 415
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 atcttatatgatattattattttgatttttatttctctcatgttaagtgatattggggtt 615
Query: 416 ttatccaggaaccttttcttttcacacattttgcagcttataaatcagattattttgttc 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ttatccaggaaccttttcttttcacacattttgcagcttataaatcagattattttgttc 675
Query: 476 tcatttttcatggtaaatgtgtaacttctcaatattcatattttataatccctggatatt 535
| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 676 ttatttttcatggtaaatgtgtaacttctcaatattcatattttataagccctggatatt 735
Query: 536 gacatcttaactaaatgcatgaattgg-----gtttt------------------ttttg 572
||||||||||||||||||||||||||| ||||| |||||
Sbjct: 736 gacatcttaactaaatgcatgaattggtttttgttttgttttgttttgttttgttttttg 795
Query: 573 ccttgcatatgttaataggtcactttttttt---actgttta 611
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 796 ccttgcatatgttaataggtcactttttttttttactgttta 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1012
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1002
Effective search space: 602202
Effective search space used: 602202
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no131_a24.g1 MSMg01no131_a24.g1 CHROMAT_FILE:
MSMg01no131_a24.g1 PHD_FILE: MSMg01no131_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:09 2005
(637 letters)
>mm_chr6_26074550_26075587
Length = 1038
Score = 1135 bits (587), Expect = 0.0
Identities = 626/639 (97%), Gaps = 3/639 (0%)
Strand = Plus / Minus
Query: 1 attctctttc-aactttcacttggagaagagatgtcacagtataaggacaggcgatgaat 59
|||||||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||
Sbjct: 838 attctctttcaaactttcacttggagaggagatgtcagagtataaggacaggggatgaat 779
Query: 60 ctcactttctgtgggatggtgctaaatgactttctccatgttccctaacttgttgacatc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 ctcactttctgtgggatggtgctaaatgactttctccatgttccctaacttgttgacatc 719
Query: 120 acacatattaccttttcgattaaaccccatcacattttggaatttgcttcaagatcatgt 179
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 acacatattactttttcgattaaaccccatcacattttggaatttgcttcaagatcatgt 659
Query: 180 atgaagtttacagccctgaacgagacccatgtgaaagaggaattattaccaacataataa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 atgaagtttacagccctgaacgagacccatgtgaaagaggaattattaccaacataataa 599
Query: 240 ttactagcaacatatggaaactggactgagcacataaaacaaaatgtctgtccattgagt 299
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ttactagcaacatagggaaactggactgagcacataaaacaaaatgtctgtccattgagt 539
Query: 300 tgatagtaaatatatagcttttatacttgccttgcacttgcaagttaaagttagaaagag 359
||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 538 tgatagtaaatatatggcttttatacttgccttgcacttgaaagttaaaattagaaagag 479
Query: 360 gttttcttttcctcttctggtataacagtttatcttcagagaaggagtacagattataca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gttttcttttcctcttctggtataacagtttatcttcagagaaggagtacagattataca 419
Query: 420 ctggagttgagggaacaaagacactgataagcaaattttt-cctaaacttgacttagtaa 478
||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 418 ctggagttgagggaacaaagacactaataagcaaattttttcctaaacttgacttagtaa 359
Query: 479 attaaagcaaaaaaacaaaacaccaatgcttggtctggggacagatctcagtggatgagg 538
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 attaaagcaaaaaa-caaaacaccaatgcttggtctggggacagatctcagtggatgagg 300
Query: 539 tgcttgtcacaacgtgtgaagtcctgagactagactttcaggacctattacactgcaagt 598
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 299 tgcttgtcacaacgtgtgaagtcctgagactagactttcaggacctattacagtgcaagt 240
Query: 599 atgtcatcctagcgcttctacagattaaaggagatagga 637
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 atgtcatcctagcgcttctacagattaaaggagatagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1038
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1028
Effective search space: 644556
Effective search space used: 644556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
