Query= MSMg01no131_b01.b1 MSMg01no131_b01.b1 CHROMAT_FILE:
MSMg01no131_b01.b1 PHD_FILE: MSMg01no131_b01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:09 2005
(230 letters)
>mm_chr6_24099332_24099961
Length = 630
Score = 414 bits (214), Expect = e-120
Identities = 226/230 (98%)
Strand = Plus / Plus
Query: 1 cagccacaggggtaaagtactgtaagctccggcaacatatttgccgtctctgactagtct 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 cagccacaggggtaaagtactgtaagctccggcaacatatttgctgtctctgactagtct 260
Query: 61 tctccacccctctatatgttctatcacctaagaaatatagaatttggggctccagatttc 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctccacccctctacatgttctatcacctaagaaatatagaatttggggctccagatttc 320
Query: 121 tgagaagctgaacctcagcggagagggaaaagcaatagagggataacccttgccatgctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagaagctgaacctcagcggagagggaaaagcaatagagggataacccttgccatgctc 380
Query: 181 ttctccaaaataatcatatttagaaagggcagaagaaaagttgggaggaa 230
|||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 381 ttctccaaaataatcataattagaaaggacagaagaaaagttgggaggaa 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 230
Length of database: 630
Length adjustment: 9
Effective length of query: 221
Effective length of database: 621
Effective search space: 137241
Effective search space used: 137241
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no131_b01.g1 MSMg01no131_b01.g1 CHROMAT_FILE:
MSMg01no131_b01.g1 PHD_FILE: MSMg01no131_b01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:10 2005
(307 letters)
>mm_chr6_24252634_24253340
Length = 707
Score = 412 bits (213), Expect = e-119
Identities = 240/249 (96%), Gaps = 3/249 (1%)
Strand = Plus / Minus
Query: 60 ttctgagctctctgctccttatactctttccaaagaccagaactgatctcccaacacaca 119
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 399 ttctgagctctctgctcattatactctttccaaagaccagaattgatctcccaacaccca 340
Query: 120 tatgggcagcttacaaccacctgtagttctagaagatcccataccctcttttgacctcca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tatgggcagcttacaaccacctgtagttctagaagatcccataccctcttttgacctcca 280
Query: 180 tgtgggccatacatttacacatataaacattaaaataaattattaaaaaattccaaatga 239
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 279 tgtgggccatacatttacacacataaacattaaaataaattattaaaaa-ttccaaatga 221
Query: 240 gagagtttggagagtttttgggtttgtgaaatgatgaaaaaaatcaatcaatc-atctat 298
|||||||||||||| |||||||||||||||| |||||||||||||||||| || ||||||
Sbjct: 220 gagagtttggagagcttttgggtttgtgaaaagatgaaaaaaatcaatca-tctatctat 162
Query: 299 ctatctatc 307
|||||||||
Sbjct: 161 ctatctatc 153
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 707
Length adjustment: 9
Effective length of query: 298
Effective length of database: 698
Effective search space: 208004
Effective search space used: 208004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
