Query= MSMg01no131_c14.b1 MSMg01no131_c14.b1 CHROMAT_FILE:
MSMg01no131_c14.b1 PHD_FILE: MSMg01no131_c14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:17 2005
(345 letters)
>mm_chr6_143301359_143302103
Length = 745
Score = 644 bits (333), Expect = 0.0
Identities = 342/345 (99%)
Strand = Plus / Minus
Query: 1 gagagtgcatagtaggcctgccttctggctctaagctcacatccttctcacttggtgcta 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gagagcgcatagtaggcctgccttctggctctaagctcacatccttctcacttggtgcta 486
Query: 61 ctggagaaattgctaaacctgggggtacttggccacaggaaggaagcactaaggagcaca 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 485 ctggagaaattgctaaacctggggatacttggccacaggaaggaagcactaaggagcaca 426
Query: 121 ctcattgagtgcctatctgctctgcgagctttagaatgttagctgccagactgccattgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ctcattgagtgcctatctgctctgcgagctttagaatgttagctgccagactgccattgt 366
Query: 181 acatgtctattacccattacaatcacacagcccaggtgctgctccaatttccctccagca 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 365 acatgtctattacccattacaaccacacagcccaggtgctgctccaatttccctccagca 306
Query: 241 cgatggatttcacgccttcccaagtgaaattctcatacttcataattgttcggaagatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 cgatggatttcacgccttcccaagtgaaattctcatacttcataattgttcggaagatca 246
Query: 301 tcaagaaaaaaataataataaggagaggaggaataaagaagaaat 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tcaagaaaaaaataataataaggagaggaggaataaagaagaaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no131_c14.g1 MSMg01no131_c14.g1 CHROMAT_FILE:
MSMg01no131_c14.g1 PHD_FILE: MSMg01no131_c14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:17 2005
(116 letters)
>mm_chr6_143158319_143158840
Length = 522
Score = 194 bits (100), Expect = 2e-54
Identities = 114/122 (93%), Gaps = 6/122 (4%)
Strand = Plus / Plus
Query: 1 gtatccttatattctggtatcccgacatttctgaagtcctactagctgtgc------atg 54
||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 gtatccttagattctggtatcccgacatttctgaagtcctactagctgtgcgtgtgcatg 260
Query: 55 tgcgtgtgtgagatgtatgtaggttgtatgtaccgctatatcagtatgggggtcagaaga 114
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 tgcgtgtgtgagatgtatgtaggttgtatgtaccgctatatcagcatgggggtcagaaga 320
Query: 115 ca 116
||
Sbjct: 321 ca 322
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 116
Length of database: 522
Length adjustment: 8
Effective length of query: 108
Effective length of database: 514
Effective search space: 55512
Effective search space used: 55512
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
