NAATTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAAAGCTTATTGCGTAGTCAAGCTCTGACAGAGCTAATGTA
GCCCATTCTAACTGCTCACTCCAAAACGTCCAAGAGGCCTTAAGAATCGC
ACTGAATCTACTCTGCCTGTGTTCTATAAATGGAGTAACAAAGCAAATAT
GACAGACCATCTGTTTAGGACACGGTTTTCTGAATATTTTAAGCCCTGTG
TTGACTCATAGTGTTCAGTAAAGATATTTCTCCCAAAATATTACTGCTCA
TCGACAGTGCAATCCATCATAGAAAGGCACGATAGAGACAGATGAGGAGA
TGGATGCTCTTCTGATGTTTGCTTATACAACACTCAGTGCAGCATTTCTA
TGTTCAAGTTCTGTTACTTAACAATACATTTGGAAGGCCAGTTCTTTCGT
AGATAGGGACCCCTTCAATGGATTCAGTCATGATAAGCTAAAAGTCTGGA
AAGGATTGATGGTTGTACAGGTCTTTAAGGACACGATTCATGAGGAGAGT
TCAAATTCTCGACATCAACTGAAGTTTAAGGGTTCAATCTAGATCCCATG
GAAATTCCAGAGTCAAAGTCTTCAGTGGAAAAAGCTAGAAAAAAGTGGTG
AAGAAATGAAGGCTGGAGATGTGATTAAAAGACAATAACTGACAGCTCAT
GAACATATGTGGTGCATGAGTACT

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACTGAATGGCAGA
GAAGCACCTGAAAAAATGTTTAACATCCTTAATCATCAGGGAAATGCAAA
TCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATC
AAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAAC
ACTCCTCCATTGTTGGTGGGATTACAGGCTTGTACAACCACACTGGAAAT
CAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACTGGAGGATCCA
GCAATACCGCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAA
GGACACATGCTCCACTATGTCCATAGCAGCCTTATTTATAATAGCCAGAA
GCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATG
TGGTACATCTAACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTT
ATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGA
GGTAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTG
GATATTAGCCCAAACCTAGGATACCCAAGATATAAGATACAATTTCCTAA
ACACATGAAACTCAAGAAAAA

Query= MSMg01no131_d18.b1 MSMg01no131_d18.b1 CHROMAT_FILE:
MSMg01no131_d18.b1 PHD_FILE: MSMg01no131_d18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:45:23 2005
         (649 letters)



>mm_chr6_62251790_62252840
          Length = 1051

 Score = 1178 bits (609), Expect = 0.0
 Identities = 640/651 (98%), Gaps = 2/651 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtcaagctctgacagagctaatgtagcccattctaactgctcactccaaaacgtccaaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtcaagctctgacagagctaatgtagcccattctaactgctcactccaaaacgtccaaga 260

                                                                       
Query: 61  ggccttaagaatcgcactgaatctactctgcctgtgttctataaatggagtaacaaagca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggccttaagaatcgcactgaatctactctgcctgtgttctataaatggagtaacaaagca 320

                                                                       
Query: 121 aatatgacagaccatctgtttaggacacggttttctgaatattttaagccctgtgttgac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatatgacagaccatctgtttaggacacggttttctgaatattttaagccctgtgttgac 380

                                                                       
Query: 181 tcatagtgttcagtaaagatatttctcccaaaatattactgctcatcgacagtgcaatcc 240
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 tcatagtgttcagtaaagatatttctcccaaaatattactgctcattgacagtgcaatcc 440

                                                                       
Query: 241 atcatagaaaggcacgatagagacagatgaggagatggatgctcttctgatgtttgctta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcatagaaaggcacgatagagacagatgaggagatggatgctcttctgatgtttgctta 500

                                                                       
Query: 301 tacaacactcagtgcagcatttctatgttcaagttctgttacttaacaatacatttggaa 360
           |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct: 501 tacaacactcagtgcagcatttctatgttcaacttctgttacttaacaatacatttggga 560

                                                                       
Query: 361 ggccagttctttcgtagatagggaccccttcaatggattcagtcatgataagctaaaagt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggccagttctttcgtagatagggaccccttcaatggattcagtcatgataagctaaaagt 620

                                                                       
Query: 421 ctggaaaggattgatggttgtacaggtctttaaggacacgattcatgaggagagttcaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctggaaaggattgatggttgtacaggtctttaaggacacgattcatgaggagagttcaaa 680

                                                                       
Query: 481 ttctcgacatcaactgaagtttaagggttcaatctagatcccatggaaattccagagtca 540
           |||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 681 ttcttgacatcaactgtagtttaagggttcaatctagatcccttggaaattccagagtca 740

                                                                       
Query: 541 aagtcttcagtggaaaaagctagaaaaaa--gtggtgaagaaatgaaggctggagatgtg 598
           |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||
Sbjct: 741 aagtcttcagtggaaaaagctagaaaaaaaagtggtgaagaaatgaaggctggagatgtg 800

                                                              
Query: 599 attaaaagacaataactgacagctcatgaacatatgtggtgcatgagtact 649
           |||||||||||||| |||||| |||||||||||| ||||||||||||||||
Sbjct: 801 attaaaagacaatacctgacatctcatgaacatacgtggtgcatgagtact 851


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1051
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1041
Effective search space:   665199
Effective search space used:   665199
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)