Query= MSMg01no132_d01.b1 MSMg01no132_d01.b1 CHROMAT_FILE:
MSMg01no132_d01.b1 PHD_FILE: MSMg01no132_d01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:38 2005
(424 letters)
>mm_chr6_53745432_53746254
Length = 823
Score = 768 bits (397), Expect = 0.0
Identities = 415/421 (98%), Gaps = 1/421 (0%)
Strand = Plus / Minus
Query: 1 gctctctaagactccaacgtcagattgggactgctaaaacatctagtttcctggaatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gctctctaagactccaacgtcagattgggactgctaaaacatctagtttcctggaatgaa 685
Query: 61 cactttccagatcgtgggcctttcacgcaggagacagcctttgttcaactacccagagca 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cactttccagatcgtgggcctttcacgcaggagacagcctttgttcaactacccagagct 625
Query: 121 cagcagccttttctcctcctgagctatgtaggttttggaggctgattaacccatgtggcc 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 624 cagcagccttttctcctcctgagctatgtagg-tttggaggctgattaacccatgtggcc 566
Query: 181 aaccggtgaactacaaggctgtgactctgggagaagcccagtcactgcacatgactagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaccggtgaactacaaggctgtgactctgggagaagcccagtcactgcacatgactagca 506
Query: 241 tttcttttgcacttcatctggtggccccgtagggaatgggggactccagagtcccatgct 300
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 505 tttcttttgcacttcatctggtggcccggtagggaatgggggactccagagtcccatgct 446
Query: 301 cttgactggaatggacaggacttcagttctagccctcttacctctgagctctggctctct 360
||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 445 cttgactggaatggacaggacttcaattctagctctcttacctctgagctctggctctct 386
Query: 361 ctaaccaagtctctggtttctcatctgcaaattctgtgtatatccaggcctgtttgattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 385 ctaaccaagtctctggtttctcatctgcaaattctgtgtatatccaggcctgtgtgattt 326
Query: 421 a 421
|
Sbjct: 325 a 325
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 823
Length adjustment: 9
Effective length of query: 415
Effective length of database: 814
Effective search space: 337810
Effective search space used: 337810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_d01.g1 MSMg01no132_d01.g1 CHROMAT_FILE:
MSMg01no132_d01.g1 PHD_FILE: MSMg01no132_d01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:38 2005
(369 letters)
>mm_chr6_53617023_53617791
Length = 769
Score = 659 bits (341), Expect = 0.0
Identities = 362/369 (98%)
Strand = Plus / Plus
Query: 1 gttgtttgtctcttacctagatagttactgccatttaaagtgaaatcagcccagctaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttgtttgtctcttacctagatagttactgccatttaaagtgaaatcagcccagctaagg 260
Query: 61 ttgcacagtgtgttccggtctcttctccacttcctctccagagcttgcttgttttaaact 120
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 261 ttgcacagtgtgttccggtctcttctccacttcctctccagagcttgctagttttagact 320
Query: 121 aggcttcttgactgtccatcgctttagaaacaaacctcctgggtaaaggtttcctacgct 180
|||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |
Sbjct: 321 aggcttcttgactgtccatcgctttaaaaacaaacctcctcggtaaaggtttcctacgtt 380
Query: 181 gcatgcttttgataatattcagacatgtgatgctacaatgtattgctttttgtctggtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcatgcttttgataatattcagacatgtgatgctacaatgtattgctttttgtctggtaa 440
Query: 241 aaaggccatatgcattcagtacaaacgttcaggttttgagtttggatcttttcaggtttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaggccatatgcattcagtacaaacgttcaggttttgagtttggatcttttcaggtttt 500
Query: 301 gggttttggactaggaatttccagtgctgtattctcttttaatggtaggcagtagcagtg 360
||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggatttggactaggaattcccagtgctgtattctcttttaatggtaggcagtagcagtg 560
Query: 361 agctaccat 369
|||||||||
Sbjct: 561 agctaccat 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
