Query= MSMg01no132_e07.b1 MSMg01no132_e07.b1 CHROMAT_FILE:
MSMg01no132_e07.b1 PHD_FILE: MSMg01no132_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:44 2005
(634 letters)
>mm_chr6_51421819_51422852
Length = 1034
Score = 1210 bits (626), Expect = 0.0
Identities = 632/634 (99%)
Strand = Plus / Plus
Query: 1 cagaaaaaccctctctgggcgtgtgggtgggggagctagaacctgtggtggacatggttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagaaaaaccctctctgggcgtgtgggtgggggagctagaacctgtggtggacatggttg 260
Query: 61 tgccttcctttaatcccatcataagtgggtgaattgctgttagaagccagcctacctaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgccttcctttaatcccatcataagtgggtgaattgctgttagaagccagcctacctaag 320
Query: 121 tccttgtatttaccagcattctaaagaaaaaggaattaacactaagtaaggcttttctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccttgtatttaccagcattctaaagaaaaaggaattaacactaagtaaggcttttctta 380
Query: 181 aggaggatcacaatacatttttttgaaaaagcgttgtacagtttttgctggatgcttttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggaggatcacaatacatttttttgaaaaagcgttgtacagtttttgctggatgcttttg 440
Query: 241 aggtaaaaaatgcatgtttgtgggttataaaacagctcaatcttcagagcccaaggaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggtaaaaaatgcatgtttgtgggttataaaacagctcaatcttcagagcccaaggaaaa 500
Query: 301 gtggaaagaaaaaacaagtttctaccagagtgtgccttgatttccacacaggagctccat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtggaaagaaaaaacaagtttctaccagagtgtgccttgatttccacacaggagctccat 560
Query: 361 catattgttaatgagctgaatgggggaagagtcatggacagctctataaaagtcttgtgg 420
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 561 catattgttaatgagctgaatgggggaagagtcgtggacagctctataaaagtcttgtgg 620
Query: 421 gttggcatgattgccctggaagctgtgctgttctggagacactgagcattcattagtgca 480
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gttggcatgattaccctggaagctgtgctgttctggagacactgagcattcattagtgca 680
Query: 481 cagagagtgagttagatagagctcacgttgccatgagcaagaattacaaactgtctagga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagagagtgagttagatagagctcacgttgccatgagcaagaattacaaactgtctagga 740
Query: 541 gtgatctaagactgttagatcaattctgtttcttttcagcgatttctgactgttgctaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtgatctaagactgttagatcaattctgtttcttttcagcgatttctgactgttgctaaa 800
Query: 601 tccagtgttagttttcttgggatttctagtaagt 634
||||||||||||||||||||||||||||||||||
Sbjct: 801 tccagtgttagttttcttgggatttctagtaagt 834
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_e07.g1 MSMg01no132_e07.g1 CHROMAT_FILE:
MSMg01no132_e07.g1 PHD_FILE: MSMg01no132_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:44 2005
(619 letters)
>mm_chr6_51567393_51568407
Length = 1015
Score = 1089 bits (563), Expect = 0.0
Identities = 605/621 (97%), Gaps = 8/621 (1%)
Strand = Plus / Minus
Query: 1 tctgcaactccatggtgtgacatcgccgagtggctcttcctcggtgactttacttttttt 60
|||||| ||||||||||||| ||| |||||||||||||||| |||||||||| |||
Sbjct: 815 tctgcagctccatggtgtgatgtcggcgagtggctcttcctcagtgactttac----ttt 760
Query: 61 tctctttaatgactttactatcttctgctgagttgacttgacttatcaaagacagcatga 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 tatctttaatgactttactatcttctgctgagttgacttgacttatcaaagacagcatga 700
Query: 121 accttctaagatggaaatacattattctttcttgaaatgttcctgacgttttctaagtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 accttctaagatggaaatacattattctttcttgaaatgttcctgacgttttctaagtgt 640
Query: 181 gggattgactttgcaggctctgttgggctcttctttctcagtttccagttaatgtgacat 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gggattgactttgcaggttctgttgggctcttctttctcagtttccagttaatgtgacat 580
Query: 241 acttccgggtttaaagtgttaagacattcgtgccattcagatgtccgtgacttgaagctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 acttccgggtttaaagtgttaagacattcgtgccattcagatgtccgtgacttgaagctg 520
Query: 301 tcttgttagagttc-aagcaaattgtggcatatctagatttaagcatagtttctgttgag 359
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tcttgttagagttcaaag-aaattgtggcatatctagatttaagcatagtttctgttgag 461
Query: 360 aactcttgaatttgactttttttttt-aatttagtggctttaaggattttttttttctaa 418
|||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||
Sbjct: 460 aactcttgaatttgactttttttttttaatttagtggctttaaggattttttttt-ctaa 402
Query: 419 ttattttctgtccttttaaattttagtagcaagtagttaggcttctatcgtctccatgtt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ttattttctgtccttttaaattttagtagcaagtagttaggcttctatcgtctccatgtt 342
Query: 479 gtttctttcctcatacatagtaagcatatgaggtggtagtaatgatggtagtagtagtag 538
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 gtttctttcctcatacctagtaagcatatgaggtggtagtaatgatggtagtagtagtag 282
Query: 539 taatcctgtaacctttatgttgcttaaagactaggtcttaacttcctcgttcacaaattc 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 taatcctgtaacctttatgttgcttaaagactaggtcttaacttcctcgttcacaaattc 222
Query: 599 acgagaccagtccttgtttag 619
|||||||||||||||||||||
Sbjct: 221 acgagaccagtccttgtttag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1015
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1005
Effective search space: 612045
Effective search space used: 612045
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
