Query= MSMg01no132_h09.b1 MSMg01no132_h09.b1 CHROMAT_FILE:
MSMg01no132_h09.b1 PHD_FILE: MSMg01no132_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:59 2005
(473 letters)
>mm_chr6_121433711_121434583
Length = 873
Score = 677 bits (350), Expect = 0.0
Identities = 381/398 (95%), Gaps = 13/398 (3%)
Strand = Plus / Minus
Query: 77 gctccagctaaaagcttccccaaacatacttaatgccactccacagatgcccttccaaga 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 gctccagctaaaagcttccccaaacatacttaatgccactccacagatgcccttccaaga 810
Query: 137 tcagcactagaaa-ggggggggtggttataggggactttcgggatagcgtttgaaatgta 195
||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 809 tcagcactagaaaggggggggggggttataggggactttcgggatagcatttgaaatgta 750
Query: 196 aatgaagaaaatatctaataaaagaaaaaagaaaatgaagactcaaaatgaattttttaa 255
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 749 aatgaagaaaatatctaataaaagaaaaaagaaaatgaagactcaaaatgaa------aa 696
Query: 256 aaacaaaaaacaaaaacaaaaacaaaacggggtggacaagtcttcccatgctattcctgc 315
||||| |||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 695 aaaca------aaaaacaaaaacaaaatggggtggacaagtcttcccatgctattcctgc 642
Query: 316 atggcttgctgagttttcagtgtgtccttctcggaggattattctcagaagcttccagct 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 atggcttgctgagttttcagtgtgtccttctcggaggattattctcagaagcttccagct 582
Query: 376 ttctgcaaagtcaatacaggctccttctggggcagaagatgtgggtacagtgggcaatgg 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ttctgcaaagtcaatacaggctccttctggggcagaagatgtgggtacagtgggcaatgg 522
Query: 436 atgttcctacctctccccaatctggaggttctgtttgt 473
||||||||||||||||||| ||||||||||||||||||
Sbjct: 521 atgttcctacctctccccagtctggaggttctgtttgt 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_h09.g1 MSMg01no132_h09.g1 CHROMAT_FILE:
MSMg01no132_h09.g1 PHD_FILE: MSMg01no132_h09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:46:59 2005
(282 letters)
>mm_chr6_121312153_121312834
Length = 682
Score = 530 bits (274), Expect = e-155
Identities = 280/282 (99%)
Strand = Plus / Plus
Query: 1 tgtcctgcctggacttttagggatggcttaggcctctcaacactaagatcactaagctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtcctgcctggacttttagggatggcttaggcctctcaacactaagatcactaagctgc 260
Query: 61 aatcccagtgccacaatgtctaagccactgtcatacttagcatcacaaccctggtgttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatcccagtgccacaatgtctaagccactgtcatacttagcatcacaaccctggtgttcc 320
Query: 121 catggtgtcctttcctgctcatggagctggctcctcttccctccctaagatatctgtctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catggtgtcctttcctgctcatggagctggctcctcttccctccctaagatatctgtctg 380
Query: 181 actctcctggaactcttgctctcaaaggctcgaatatactcaatcaaggaggcagacatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actctcctggaactcttgctctcaaaggctcgaatatactcaatcaaggaggcagacatt 440
Query: 241 cctcctgttaatattggtctcggagcttgaggcctttagaag 282
||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 cctcctggcaatattggtctcggagcttgaggcctttagaag 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
