Query= MSMg01no132_h23.b1 MSMg01no132_h23.b1 CHROMAT_FILE:
MSMg01no132_h23.b1 PHD_FILE: MSMg01no132_h23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:01 2005
(658 letters)
>mm_chr6_33492609_33493666
Length = 1058
Score = 1243 bits (643), Expect = 0.0
Identities = 652/655 (99%)
Strand = Plus / Minus
Query: 4 gaattctaccagacttcccaagaagagctaatatcaatactcttcaaattattccacaaa 63
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1030 gaattctaccagactttcaaagaagagctaatatcaatactcttcaaattattccacaaa 971
Query: 64 acagaaacagaaggaatattgcaaaactcattttatgaggccacagccagctgataacga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 970 acagaaacagaaggaatattgcaaaactcattttatgaggccacagccagctgataacga 911
Query: 124 taccacacaagaattcaacaaagagagagaattacagaccaatttcccccatactaggct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 taccacacaagaattcaacaaagagagagaattacagaccaatttcccccatactaggct 851
Query: 184 gccttgtccagcctcaatctaatgtttcacgtcagaaaatagccatttctctccaagtgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 gccttgtccagcctcaatctaatgtttcacgtcagaaaatagccatttctctccaagtgc 791
Query: 244 ttctcataaaatcattatacattttatttttacaatagaaaataaaatacccaaatacca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 ttctcataaaatcattatacattttatttttacaatagaaaataaaatacccaaatacca 731
Query: 304 ttttctattgcagctaaaggagaaaaaaaatccaaagtaggccaaggatccaacaaatgg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ttttctattgcagctaaaggagaaaaaaaatccaaagtaggccaaggatccaacaaatgg 671
Query: 364 attatttaaactgtatgggataagaaagaacagagatagacagaaaacaaacagaagaaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 attatttaaactgtatgggataagaaagaacagagatagacagaaaacaaacagaagaaa 611
Query: 424 acaatagcactgggaggcttgtgaggagaactgtgtggcaatcacactggagcaaagcga 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 acaatagcactgggaggcttgtgaggagaactgtgtggcaatcacactggagcaaagcga 551
Query: 484 ggaggtggaggcagcaggcaacaccaatggaactacatctggcattcagggcaaagacaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ggaggtggaggcagcaggcaacaccaatggaactacatctggcattcagggcaaagacaa 491
Query: 544 acgaccataaccaaaagagaccacgggccagtcagtcagaatccatgactagaacgacaa 603
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 490 acgaccataaccaaaagagaccacgggccagtcagtcagaatccatgactagaaggacaa 431
Query: 604 actggtccctgtaacctctgaaatcatgcgtctgtttttcttaaagctgtttttc 658
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 actggtccctgtaacctctgaaatcatgcgtctgtttttcttaaagctgtttttc 376
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no132_h23.g1 MSMg01no132_h23.g1 CHROMAT_FILE:
MSMg01no132_h23.g1 PHD_FILE: MSMg01no132_h23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:47:02 2005
(307 letters)
>mm_chr6_33338455_33339160
Length = 706
Score = 557 bits (288), Expect = e-163
Identities = 303/308 (98%), Gaps = 3/308 (0%)
Strand = Plus / Plus
Query: 1 tgcctttttttaatgttcaaggtgttccaaagtttataatcagagcattgatggagaaag 60
|||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 tgcc-ttttttaatgttcaaggtgttccaaagcttataatcagagcattgatggagaaag 259
Query: 61 accatctagtttgtaatgagagtggagtaattatagtgactagatgagcctatg-tagtt 119
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 260 accatctagtttgtaatgagagtggagtaattatagtgactagatgagccta-gatagtt 318
Query: 120 tacacataatttgtaaccagaaaagagctgagcattttagagaattaggggatgatttac 179
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tacacatcatttgtaaccagaaaagagctgagcattttagagaattaggggatgatttac 378
Query: 180 cccagactctgtgctgtctccatcttttcgcacataggctaacactcaggtcttgtctgt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cccagactctgtgctgtctccatcttttcgcacataggctaacactcaggtcttgtctgt 438
Query: 240 actatctctcatgtattggcctgattctcagccagcccacctcctcagtatcactaggtg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 actatctctcatgtattggcctgattctcagccagcccacctcctcagtatcactaggtg 498
Query: 300 tcatgtat 307
||||||||
Sbjct: 499 tcatgtat 506
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 706
Length adjustment: 9
Effective length of query: 298
Effective length of database: 697
Effective search space: 207706
Effective search space used: 207706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|