Query= MSMg01no133_o07.b1 MSMg01no133_o07.b1 CHROMAT_FILE:
MSMg01no133_o07.b1 PHD_FILE: MSMg01no133_o07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:49 2005
(570 letters)
>mm_chr6_64650888_64651857
Length = 970
Score = 1064 bits (550), Expect = 0.0
Identities = 562/566 (99%), Gaps = 2/566 (0%)
Strand = Plus / Plus
Query: 6 gaattctttccata-tcctaaaataatgacatcttcatatttacgacaggtctaattttc 64
|||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 206 gaattctttccatattactaaaataatgacatcttcatatttaccacaggtctaattttc 265
Query: 65 tccatgctaaaagacattgcctttactcagagaccaaaatatatacactttacatggatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tccatgctaaaagacattgcctttactcagagaccaaaatatatacactttacatggatt 325
Query: 125 ctcggctaatggagagcctctaactcgaatccataaaaagtagatttgtttctttgtaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ctcggctaatggagagcctctaactcgaatccataaaaagtagatttgtttctttgtaaa 385
Query: 185 caagggtcacttggatgctgttcttcaccttaaggttgtggcgcctgtgtgtatcgccct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 caagggtcacttggatgctgttcttcaccttaaggttgtggcgcctgtgtgtatcgccct 445
Query: 245 tccaccaagacaactgagttttccaaggtctattccatgtgaacaatctcttaccaatga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tccaccaagacaactgagttttccaaggtctattccatgtgaacaatctcttaccaatga 505
Query: 305 aattctgaagcagtttatgaaacatacaaaacccttgtgaactcggccttcgtaaagatc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aattctgaagcagtttatgaaacatacaaaacccttgtgaactcggccttcgtaaagatc 565
Query: 365 tagcactgcactgaattctgggaatacaatgatttagtcatgttcttgccctaagaagtt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tagcactgcactgaattctgggaatacaatgatttagtcatgttcttgccctaagaagtt 625
Query: 425 taaattccaatgaggaggtcagataaatcagtccagtgagtctatctcagtgagttgaca 484
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 taaattccaatgaggaggt-agataaatcagtccagtgagtctatctcagtgagttgaca 684
Query: 485 gccatgagaactgcatttctgcttcttgaccccagcgagcccagtatgactcctagagga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gccatgagaactgcatttctgcttcttgaccccagcgagcccagtatgactcctagagga 744
Query: 545 ccttataatacacaaaattgaaagcc 570
||||||||||||||||||||||||||
Sbjct: 745 ccttataatacacaaaattgaaagcc 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no133_o07.g1 MSMg01no133_o07.g1 CHROMAT_FILE:
MSMg01no133_o07.g1 PHD_FILE: MSMg01no133_o07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:48:50 2005
(543 letters)
>mm_chr6_64771333_64772275
Length = 943
Score = 891 bits (461), Expect = 0.0
Identities = 473/477 (99%)
Strand = Plus / Minus
Query: 1 taaatgaccttttaaaaaaccaaattagaactttgtaggcatcatagctgccctctgtac 60
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 477 taaatgaccttttaaaaaaccaaattagaactttgtaggcatcatagctgaactctgtac 418
Query: 61 tatgatcagaagaattcttatcctggctaatgagggttttatttagccttgttttcttca 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 417 tatgatcagaagaattcttatcctggttaatgagggttttatttagccttgttttcttca 358
Query: 121 ttctttgactttaagtattttactcagagttacaggtaaataagatgactctatgcaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ttctttgactttaagtattttactcagagttacaggtaaataagatgactctatgcaacc 298
Query: 181 ttgactgtgtcaagatgagaagacatgtaaggaggcaagcatgctatcacagaatgccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ttgactgtgtcaagatgagaagacatgtaaggaggcaagcatgctatcacagaatgccaa 238
Query: 241 gtgtgggatggacaccgtgctgcccaccaggatcttgatctagggccttgtatatactaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 gtgtgggatggacaccgtgctgcccaccaggatcttgatctagggccttgtatatactaa 178
Query: 301 gcaagcatggtacaaccgagctatagctccagccctatctctatgttatgttgtgacaat 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 gcaagcatggtacaactgagctatagctccagccctatctctatgttatgttgtgacaat 118
Query: 361 ctcactaagttgcccaggtcttaaacttaatatatagtccagacagtctttgcatttctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 ctcactaagttgcccaggtcttaaacttaatatatagtccagacagtctttgcatttctc 58
Query: 421 ttaagtagctgggaatacccaggactgagtagctgtgggtaacttgcaccatgagtc 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 ttaagtagctgggaatacccaggactgagtagctgtgggtaacttgcaccatgagtc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space: 497289
Effective search space used: 497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
