Query= MSMg01no134_p13.b1 MSMg01no134_p13.b1 CHROMAT_FILE:
MSMg01no134_p13.b1 PHD_FILE: MSMg01no134_p13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:50:56 2005
(330 letters)
>mm_chr6_18614216_18614945
Length = 730
Score = 600 bits (310), Expect = e-176
Identities = 325/330 (98%)
Strand = Plus / Minus
Query: 1 cggcttgtcgcctcaagtctgggtgagatttcagggtttctaaagatggtcttatacaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 cggcttgtcgcctcaagtctgggtgagatttcagggtttctaaagatggtcttatacaca 471
Query: 61 agacacgcattccctctctctggttgccatcttaagcaggctttaaaaagtcatggcaga 120
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 agacatgcattccctttctctggttgccatcttaagcaggctttaaaaagtcatggcaga 411
Query: 121 ccaaagtgatgattttttttctatatatgtctttacgcttcaccctcatcacatgttcat 180
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 410 ccaaagtgatgattttttttctatatgtgtctttacacttcaccctcatcacatgttcat 351
Query: 181 cttggggtctgggagcctacaaaatcacagtgcttccacccacacagaatgcctcttttt 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 350 cttggggtctgggagcctacaaaatcaccgtgcttccacccacacagaatgcctcttttt 291
Query: 241 gtttccctttaaagtcctagtgccctgtgggagattgtatcccctccacaattatcgcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gtttccctttaaagtcctagtgccctgtgggagattgtatcccctccacaattatcgcta 231
Query: 301 tatcctcagccctgagcacttgtctcagga 330
||||||||||||||||||||||||||||||
Sbjct: 230 tatcctcagccctgagcacttgtctcagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no134_p13.g1 MSMg01no134_p13.g1 CHROMAT_FILE:
MSMg01no134_p13.g1 PHD_FILE: MSMg01no134_p13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:50:57 2005
(636 letters)
>mm_chr6_18500382_18501417
Length = 1036
Score = 1025 bits (530), Expect = 0.0
Identities = 621/684 (90%), Gaps = 51/684 (7%)
Strand = Plus / Plus
Query: 1 agtaggatcttcaccaagatttatgcttttcttcttgaataataaaaaaaagcctttttt 60
||||||||||||||||||||||||||||||||||| | |||||||||||||| |||||
Sbjct: 156 agtaggatcttcaccaagatttatgcttttcttctcg---aataaaaaaaagccattttt 212
Query: 61 ttgcttgccataaggaataacatcactaggctgtgtgtattgtgaatctcaatcttgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 ttgcttgccataaggaataacatcactaggctgtgtgtattgtgaatctcaatcttgctc 272
Query: 121 taatctgtcaaaaataacagacacatacaagagaagaattcagtctaacttaaattagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 taatctgtcaaaaataacagacacatacaagagaagaattcagtctaacttaaattagga 332
Query: 181 acacattctattatttatggtgaactggtttcaaaattactagaaagatgtattaggaaa 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 333 acacattctattatttatggtgaactggtttcaaaattactagaaggatgtattaggaaa 392
Query: 241 tgcagacaagtgttatacaaaatactaagttcataaataatgttaaataatacagagacc 300
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 393 tgcagacaagtgttatacaaaatactaagttcataaagaatgttaaataatacagagagc 452
Query: 301 attatccaatatgcaaatctgttttcgtatgggcaggcatatatatat------------ 348
||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 453 attatccaatatgcaaatctgttttcgtatgggtgggcatatatatatatatatatatat 512
Query: 349 ------------------------------------caactgaacacgttttttactaga 372
||||||||||| ||||||||||||
Sbjct: 513 atatatatatatatatatatatatatatatatatatcaactgaacacattttttactaga 572
Query: 373 aatcttaggctcattttcctaccacagctgcgctacatcttctgggcttgcaattgtgca 432
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 573 aatcttaggctcattttcttaccacagctgtgctacatcttctgggcttgcaattgtgca 632
Query: 433 gtagatggttgcattcgtctcactctaggaggtaactttgccccagtgctgggttcccta 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 gtagatggttgcattcgtctcactctaggaggtaactttgccccagtgctgggttcccta 692
Query: 493 ctggttgagtgactctgcttattttgccttatcctttgcagttcaggtacacctctgtcc 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 693 ctggttgagtgactctgcttattttgccttatcctttgcagttcaggtacacctccgtcc 752
Query: 553 ctttcctgatttctagggattactgatctagttttcctttatgatttctcttttctccct 612
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 753 ctttcctgatttctagggattactgatctagttttcctttatgatctctcttttctccct 812
Query: 613 tttgcacacattggctggttccct 636
||||||||||||||||||||||||
Sbjct: 813 tttgcacacattggctggttccct 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
