Query= MSMg01no135_c16.b1 MSMg01no135_c16.b1 CHROMAT_FILE:
MSMg01no135_c16.b1 PHD_FILE: MSMg01no135_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:13 2005
(250 letters)
>mm_chr6_77649732_77650380
Length = 649
Score = 453 bits (234), Expect = e-132
Identities = 246/250 (98%), Gaps = 1/250 (0%)
Strand = Plus / Plus
Query: 1 acattgtttccaaacagaaaaaaactgttcaaaacaaacatgaggaaatatgtttgaatg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acattgtttccaaacagaaaaaaactgttcaaaacaaacatgaggaaatatgtttgaata 260
Query: 61 tgtaaattttgcatattttcgagaaaagtgtaatttaacaaacgatcacacaaaacagta 120
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgtaaattttgcatatttt-gagaaaagtgtaatttaacaaacgatcacacaaaacagta 319
Query: 121 agcttgactttacttacaaaaaagcatgacttgttcgtacaatggtagagaagaggaagt 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 320 agcttgactttacttacaaaaaagcatgacttgtttgtacaatggtagagaagaggaagt 379
Query: 181 aagatatctttgttaaaaggagcagctgaggaatttaagacagcaaaattgagtctgcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aagatatctttgttaaaaggagcagctgaggaatttaagacagcaaaattgagtctgcag 439
Query: 241 ataagagaaa 250
||||||||||
Sbjct: 440 ataagagaaa 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 649
Length adjustment: 9
Effective length of query: 241
Effective length of database: 640
Effective search space: 154240
Effective search space used: 154240
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no135_c16.g1 MSMg01no135_c16.g1 CHROMAT_FILE:
MSMg01no135_c16.g1 PHD_FILE: MSMg01no135_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:13 2005
(338 letters)
>mm_chr6_77808915_77809652
Length = 738
Score = 638 bits (330), Expect = 0.0
Identities = 336/338 (99%)
Strand = Plus / Minus
Query: 1 taatttatgggaggttagagggacagagaataggttaatttctaaagaagttattctctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taatttatgggaggttagagggacagagaataggttaatttctaaagaagttattctctg 322
Query: 61 attaatttattcgaagtttcttttggaccttaaaggtatgttatctagaatgctaatagc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 attaatttattcgaagtttcttttggaccttaaaggtatgttatctagaatgctaatatc 262
Query: 121 actggctttagttgcataatctaatctaccaggcaaatctgaattgtataattaggatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actggctttagttgcataatctaatctaccaggcaaatctgaattgtataattaggatca 202
Query: 181 ttgccctgagccagcctggcctggaatgggctaaagtgggacattgcattggatggagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgccctgagccagcctggcctggaatgggctaaagtgggacattgcattggatggagag 142
Query: 241 gtagctttaaagactgtctgtctctgaccttttagttctctacctatactgaatgcttgc 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 gtagctttaaagactgtcggtctctgaccttttagttctctacctatactgaatgcttgc 82
Query: 301 tgataacttctacaaaaatcctaaaaactttcttggtt 338
||||||||||||||||||||||||||||||||||||||
Sbjct: 81 tgataacttctacaaaaatcctaaaaactttcttggtt 44
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
