Query= MSMg01no136_g19.b1 MSMg01no136_g19.b1 CHROMAT_FILE:
MSMg01no136_g19.b1 PHD_FILE: MSMg01no136_g19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:48 2005
(628 letters)
>mm_chr6_50572908_50573935
Length = 1028
Score = 1178 bits (609), Expect = 0.0
Identities = 621/625 (99%), Gaps = 2/625 (0%)
Strand = Plus / Minus
Query: 5 gaattctttgtttacctctgtaccccatcttttaatgggcatatttgattttctggaatc 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 990 gaattctttgtttagctctgtaccccatcttttaatgggcatatttgattttctggaatc 931
Query: 65 cagcttataaaattgccaagcttctgtaaggcaaaacacagtgtcaataagacaaaaagg 124
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 930 cagcttataaaattgccaagctcctgtaaggcaaaacacagtgtcaataagacaaaaagg 871
Query: 125 ccaccaacagattgggaaaggatttttaccaatcctaaaacttacaggggactaatatcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 ccaccaacagattgggaaaggatttttaccaatcctaaaacttacaggggactaatatcc 811
Query: 185 attctg-gccaattctaaattccccagaaagacaactagaacaaccaccttcagccccca 243
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 attctgag-caattctaaattccccagaaagacaactagaacaaccaccttcagccccca 752
Query: 244 agcccaggatctgggatgacaactcttgataacttcttcctgctgaatacgggagttgag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 agcccaggatctgggatgacaactcttgataacttcttcctgctgaatacgggagttgag 692
Query: 304 atatctttcaaggagggcagggtagggaaaaatgggagagttgggtaggccataagaagg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 atatctttcaaggagggcagggtagggaaaaatgggagagttgggtaggccataagaagg 632
Query: 364 ccatgccaacaattgttctagtctctgatgtctaagttctgattggatccatctgacagg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ccatgccaacaattgttctagtctctgatgtctaagttctgattggatccatctgacagg 572
Query: 424 tttaatgaggcaaggtgacctggactccatgacattgggagttctagaaggccagtttag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 tttaatgaggcaaggtgacctggactccatgacattgggagttctagaaggccagtttag 512
Query: 484 caggtctcatgatgaatctcaccaaagctgaaccatgtgcagtctacaaatctccaaacc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 caggtctcatgatgaatctcaccaaagctgaaccatgtgcagtctacaaatctccaaacc 452
Query: 544 aaatggaagaaccatcaaggtatttgtgtggattgtgttagtctgtggaggatgtacaga 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aaatggaagaaccatcaaggtatttgtgtggattgtgttagtctgtggaggatgtacaga 392
Query: 604 gtagttaggcaagaaatcctgaccc 628
|||||||||||||||||||||||||
Sbjct: 391 gtagttaggcaagaaatcctgaccc 367
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_g19.g1 MSMg01no136_g19.g1 CHROMAT_FILE:
MSMg01no136_g19.g1 PHD_FILE: MSMg01no136_g19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:48 2005
(598 letters)
>mm_chr6_22978305_22979302
Length = 998
Score = 1123 bits (581), Expect = 0.0
Identities = 593/597 (99%)
Strand = Plus / Plus
Query: 1 ccaccaatagaatgttcattatgagagcctccacttcctgcttccagagggagccatttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaccaatagaatgttcattatgagagcctccacttcctgcttccagagggagccatttg 260
Query: 61 tgtgccaaaagaatgtagactaagggtgtataaatacttagaattccagctctgccattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgccaaaagaatgtagactaagggtgtataaatacttagaattccagctctgccattg 320
Query: 121 gctagcgataacattagatagtcctttaactcctctgagcttcttttacctcagcaccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctagcgataacattagatagtcctttaactcctctgagcttcttttacctcagcaccag 380
Query: 181 gtggggaatgatgcttccgttttgtagagatgatgggttagaacagtgtttgcaaagtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtggggaatgatgcttccgttttgtagagatgatgggttagaacagtgtttgcaaagtgt 440
Query: 241 cagcccagcactgtttgctccttaagagacagctggtaatggttatccaggctcagtgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagcccagcactgtttgctccttaagagacagctggtaatggttatccaggctcagtgac 500
Query: 301 cccaaggaaagggaagagcccataattctagcaccttcttaactctacacaaccgagctt 360
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cccaaggaaaggaaagagcccataattctagcaccttcttaactctacacaaccgagctt 560
Query: 361 cattgactgaaaaacattttgaaataacacaattaaggacaagacttgaagtacagtaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cattgactgaaaaacattttgaaataacacaattaaggacaagacttgaagtacagtaaa 620
Query: 421 tacttttggaccaaatgcatctggagtaagatgcaagcctgtggtcatctcaaagataac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tacttttggaccaaatgcatctggagtaagatgcaagcctgtggtcatctcaaagataac 680
Query: 481 tcagtgttttatacaaaagttaaagtcgaaggaaaattgctgtctttactaatgctatcg 540
||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 681 tcagtattttatacaaaagttaaagtcgaaggcaaattgctgtctttactagtgctatcg 740
Query: 541 ttctactgctttgcaagttctttgggcaagtttttgatactgaaaagagggtgctga 597
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttctactgctttgcaagttctttgggcaagtttttgatactgaaaagagggtgctga 797
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
