Query= MSMg01no136_i10.b1 MSMg01no136_i10.b1 CHROMAT_FILE:
MSMg01no136_i10.b1 PHD_FILE: MSMg01no136_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:56 2005
(643 letters)
>mm_chr6_129398500_129399542
Length = 1043
Score = 1156 bits (598), Expect = 0.0
Identities = 631/642 (98%), Gaps = 2/642 (0%)
Strand = Plus / Plus
Query: 3 gaattcatcaccctatgca-tcttcctacaggtcatgacaacaccttctacacaacccct 61
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattcatcaccctatg-attcttcctacaggtcatgacaacaccttctacacaacccct 261
Query: 62 gataacagcacctggagcatgtctgagtactcagtcaaccttgaactcacatagcctgcc 121
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gataacagcacctagagcatgtctgagtactcagtcaaccttgaactcacatagcctgcc 321
Query: 122 tcctcactgataacctgaagcaatccttgaagctccttcccttcaatatctatcactctc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tcctcactgataacctgaagcaatccttgaagctccttcccttcaatatctatcactctc 381
Query: 182 tcctcttccttcttactcttcttcctcagtcgaggaagtacctggactagagatgaaata 241
||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 382 ccctcttccttcttactcctcttcctcagtcgaggaagtacctggactagagataaaata 441
Query: 242 ggacattgactcattcaggtctgtggattctccttcagcccatcatcatcatagcctaga 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ggacattgactcattcaggtctgtggattctccttcagcccatcatcatcatagcctaga 501
Query: 302 gatacttctaatgatagatcatttgtctccctgtatctttctcctcttcattaatctcat 361
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 502 gatacttctaatgatagatcatttgtctccctgtatctttcttctcttcattaatctcat 561
Query: 362 ttagaacagacctaaaacacttcagggagcctaaaagaccctccttggctccccagacct 421
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 562 ttagaacagacctaaaacacttcagggagcctaaaaggccctccttagctccccagacct 621
Query: 422 actcctcatggctgcccctaagatctgtgatacagctatctatacttactgcaaagaatt 481
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 622 actcctcatggctgcccctaagatctgtgacacagctatctatacttactgcaaagaatt 681
Query: 482 ctctgaaaagacagagcttcttacaatcctcttcacattcctctcataaatctttctgta 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ctctgaaaagacagagcttcttacaatcctcttcacattcctctcataaatctttctgta 741
Query: 542 gagcatcctcagcctgggcattcccaatcctggctctttataatcttaaaatcaattcaa 601
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 742 gagcatcctcagcctgggcattcccaatcctggctctttataattttaaaatcaattcaa 801
Query: 602 tacaatgaatactctcaccagaccttcttgggtctcctttag 643
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 tacaatgaatactctcaccagaccttcttgggtctcctttag 843
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no136_i10.g1 MSMg01no136_i10.g1 CHROMAT_FILE:
MSMg01no136_i10.g1 PHD_FILE: MSMg01no136_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:56 2005
(605 letters)
>mm_chr6_129526608_129527618
Length = 1011
Score = 1102 bits (570), Expect = 0.0
Identities = 599/612 (97%), Gaps = 8/612 (1%)
Strand = Plus / Minus
Query: 1 ttcctagtggatttctctttgactacatatacat------aagttctgtctcatgttttg 54
|||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 811 ttcctagtggatttctctttgactacgtatacatatgcagaagttctgtctcatgttttg 752
Query: 55 catc-tttttttgtaaaattgaaagttaagtaactaaaaagaggggaaacaaaattactg 113
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 751 catcttttttttgtaaaattgaaagttaagtaactaaaaagatgggaaacaaaattactg 692
Query: 114 ttactctccccaggccagactttcagaatcactaagtgtcttaaacattctagtaatgag 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ttactctccccaggccagactttcagaatcactaagtgtcttaaacattctagtaatgag 632
Query: 174 aagtccggaaagacaacaaacagagtggaggagattctgtgaatttgaagcccccaaaac 233
||||||||||||| ||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 631 aagtccggaaagaaaacaaacagagtggaggagattctgtgaatttgcag-ccccaaaac 573
Query: 234 tgccaccagtgggaagcatgcttaagagtgggagggtaagaaagactctggccatgagtc 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tgccaccagtgggaagcatgcttaagagtgggagggtaagaaagactctggccatgagtc 513
Query: 294 ccctgaaccagtctgtggagtcttatatcctccaactattctcatcctgggcctcttttc 353
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 512 ccctgaaccagtctgtggagtcttatatcctccaactattctcatcctgggtctcttttc 453
Query: 354 gtatccctgatagtcccccttcactcagaggcctgggaaatggctcaattctcctagctg 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gtatccctgatagtcccccttcactcagaggcctgggaaatggctcaattctcctagctg 393
Query: 414 tgcagtttgaggagtctgcctcacagtcctggggcctctactatttatgtgcagctgaga 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tgcagtttgaggagtctgcctcacagtcctggggcctctactatttatgtgcagctgaga 333
Query: 474 tgtctggattctggacttgacagcaataaagaatgtcaagatgagccaaactgacacaaa 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtctggattctggacttgacagcaataaagaatgtcaagatgagccaaactgacacaaa 273
Query: 534 cttggcctggttgttgatcaggagatacaatttgaattgtatcagagagaagtgaccctc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 cttggcctggttgttgatcaggagatacaatttgaattgtatcagagagaagtgaccctc 213
Query: 594 agggccatcaac 605
||||||||||||
Sbjct: 212 agggccatcaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1011
Length adjustment: 10
Effective length of query: 595
Effective length of database: 1001
Effective search space: 595595
Effective search space used: 595595
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
