Query= MSMg01no136_o08.b1 MSMg01no136_o08.b1 CHROMAT_FILE:
MSMg01no136_o08.b1 PHD_FILE: MSMg01no136_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:25 2005
(236 letters)
>mm_chr6_51221302_51221937
Length = 636
Score = 427 bits (221), Expect = e-124
Identities = 227/229 (99%)
Strand = Plus / Plus
Query: 6 gaattctagaacaaacctaaatcaagaattcatccaagttaaaaagccatccttttgaat 65
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 206 gaattctagaacaaagctaaatcaagaattcatcaaagttaaaaagccatccttttgaat 265
Query: 66 tagctgcccattgcccactgtaagtaagaaaaggccaacagctacctgaaagtatcaaaa 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tagctgcccattgcccactgtaagtaagaaaaggccaacagctacctgaaagtatcaaaa 325
Query: 126 atagcaatttcttttgtaccgcctacagggacaaacccaaaggtcggtctgtctgtcctg 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atagcaatttcttttgtaccgcctacagggacaaacccaaaggtcggtctgtctgtcctg 385
Query: 186 acccctgctggacattaggcacgggggtggagggcgtggggggggggtg 234
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 acccctgctggacattaggcacgggggtggagggcgtggggggggggtg 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no136_o08.g1 MSMg01no136_o08.g1 CHROMAT_FILE:
MSMg01no136_o08.g1 PHD_FILE: MSMg01no136_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:25 2005
(608 letters)
>mm_chr6_51349498_51350504
Length = 1007
Score = 737 bits (381), Expect = 0.0
Identities = 406/415 (97%), Gaps = 5/415 (1%)
Strand = Plus / Minus
Query: 1 taggccagccagggttacacggagaaaccctgtcttgaaaaacaaaaccgaccaaccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 taggccagccagggttacacggagaaaccctgtcttgaaaaacaaaaccgaccaaccaaa 354
Query: 61 caacaacaaaaaaagaaagaaaaaagttgcaaaaatggccagaagccagtatataataaa 120
||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 353 caacaac-aaaaaagaaaaaaaaaagttgcaaaaatgtccagaagccagtatataataaa 295
Query: 121 ataagtgtctcagaggcccacccgctgccactaggcatagacaggcagaagaaacccaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ataagtgtctcagaggcccacccgctgccactaggcatagacaggcagaagaaacccaga 235
Query: 181 ggccagcccgatactgcatggcctgcctgcagcaggaaccattacaatgagcaagtatgt 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 234 ggccagcccgatactgcatggcctgcctgcagtaggaaccattacaatgagcaagtatgt 175
Query: 241 ggtgcagacatgggagacaaagggaggggaaacggcttgagcatcatgaagagaggcaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 ggtgcagacatgggagacaaagggaggggaaacggcttgagcatcatgaagagaggcaga 115
Query: 301 actggagacttc-agggttgagaggaacagcctgatgtgggtagcctgatgtcacctgag 359
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 actggagac-tcgagggttgagaggaacagcctgatgtgggtagcctgatgtcacctgag 56
Query: 360 gccgtggtgagtcccagaccgtgtgctgctgagctccatgtct--gtgtgcatgg 412
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 55 gccgtggtgagtcccagaccgtgtgctgctgagttccatgtctctgtgtgcatgg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1007
Length adjustment: 10
Effective length of query: 598
Effective length of database: 997
Effective search space: 596206
Effective search space used: 596206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
