Query= MSMg01no137_f11.b1 MSMg01no137_f11.b1 CHROMAT_FILE:
MSMg01no137_f11.b1 PHD_FILE: MSMg01no137_f11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:00 2005
(239 letters)
>mm_chr6_55198372_55199012
Length = 641
Score = 424 bits (219), Expect = e-123
Identities = 236/243 (97%), Gaps = 6/243 (2%)
Strand = Plus / Minus
Query: 1 taataaagatagctcctctacagtcctccaaaaaaagacattagtaatgctaaagaaatg 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 taataaagatagctcctctacagtcctcc-aaaaaagacattagtaatgctaaagaaatg 383
Query: 61 atagtagacgttagaactatttcaaactggctacacagaaaactcagctctgg---gacg 117
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 382 atagtagacgttagaactatttcaaactggctacacagaaaactcagctctgggacgacg 323
Query: 118 ccgttacatggttaacagctggg-aatgagtgtcataaggaacctgttattgtggaaagt 176
||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||
Sbjct: 322 ccgttacatggttaacagc-gggtagtgagtgtcataaggaacctgttattgtggaaagt 264
Query: 177 ttacagcaaagagccaagtcctgaaacagcaggaaagtacgtacaagacttacagagagt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttacagcaaagagccaagtcctgaaacagcaggaaagtacgtacaagacttacagagagt 204
Query: 237 aga 239
|||
Sbjct: 203 aga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 641
Length adjustment: 9
Effective length of query: 230
Effective length of database: 632
Effective search space: 145360
Effective search space used: 145360
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no137_f11.g1 MSMg01no137_f11.g1 CHROMAT_FILE:
MSMg01no137_f11.g1 PHD_FILE: MSMg01no137_f11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:00 2005
(233 letters)
>mm_chr6_55038043_55038675
Length = 633
Score = 410 bits (212), Expect = e-119
Identities = 227/232 (97%)
Strand = Plus / Plus
Query: 1 tcactgctcctccagctaggtagagagactttgtagggcatgcatgacttttgtccctag 60
||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 201 tcactgctcctccagctaggtagggagacttcgtagggcatgcatgacttttgtccctag 260
Query: 61 agaaacccaagcctaggtgtttctgccacctacctccccaatgacaagagaagcagaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaacccaagcctaggtgtttctgccacctacctccccaatgacaagagaagcagaggc 320
Query: 121 acagctttgcccatggcactctctagagcactgccgagtgggaaccacctcttcaccaac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 acagctttgcccatggcactctctagagcactgccgagtgggaaccacctcttcgccaac 380
Query: 181 tcccaccattatctgatacatgagtcggtgagccgtcacagaagatatgccg 232
|||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 381 tcccaccattatctgatacatgagtcggggagccgtcgcagaagatatgccg 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
