Query= MSMg01no137_l06.b1 MSMg01no137_l06.b1 CHROMAT_FILE:
MSMg01no137_l06.b1 PHD_FILE: MSMg01no137_l06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:29 2005
(394 letters)
>mm_chr6_19487305_19488097
Length = 793
Score = 654 bits (338), Expect = 0.0
Identities = 377/392 (96%), Gaps = 7/392 (1%)
Strand = Plus / Minus
Query: 6 ttcttgaaatttctcccttaggttctattttatcgatctgcatatatcacaaggaaggca 65
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ttcttgaaatttctgtcttaggttctattttatcgatctgcatatatcacaaggaaggca 534
Query: 66 ggtatttcctatgctttaccactggcttctttttcaagtactgtattttacagtcaataa 125
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 ggtttttcctatgctttaccactggcttctttttcaagtactgtattttacagtcaataa 474
Query: 126 aagagcaat-aaaataatattctgtagatatatcgaagtttataatacatttgggctgtc 184
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 aagagcaataaaaataatattctgtagatatatcgaagtttataatacatttgggctgtc 414
Query: 185 agaaaggagtaaaatcatgttggaagacttgggactgaaataaa--acgtggaaaagatc 242
||||||||||||||| |||||||||||||||||||||||||||| || |||||||||
Sbjct: 413 agaaaggagtaaaattatgttggaagacttgggactgaaataaaacac---gaaaagatc 357
Query: 243 tgaaaaaataaagatctctttataatccatggcctaaaaaaactatgacctgtcagacag 302
|||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||
Sbjct: 356 tgaaaaaataaagatctccttataatccatggcct-aaaaaactatgacctggcagacag 298
Query: 303 atctgacccattggctattctgttagacaaattttattagaacacagacacaccagtgtg 362
||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 297 atctgacccattggctattctgttagataaattttattagaacacagacataccagtgtg 238
Query: 363 tttgtatcatgtctttcatattacaaccatag 394
||||||||||||||||||||||||||||||||
Sbjct: 237 tttgtatcatgtctttcatattacaaccatag 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 793
Length adjustment: 9
Effective length of query: 385
Effective length of database: 784
Effective search space: 301840
Effective search space used: 301840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no137_l06.g1 MSMg01no137_l06.g1 CHROMAT_FILE:
MSMg01no137_l06.g1 PHD_FILE: MSMg01no137_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:54:29 2005
(640 letters)
>mm_chr6_19375789_19376828
Length = 1040
Score = 1193 bits (617), Expect = 0.0
Identities = 635/641 (99%), Gaps = 2/641 (0%)
Strand = Plus / Plus
Query: 1 attttattaacttggagaatttataaaaatctaatgttctgtactcatatttcttcataa 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 attttattaacttggagaatttat-aaaatctaatgttctgtactcatatttcttcataa 259
Query: 61 tatttcttcattttttaagttgaagatgaaataacatttattgatctaagt-aaaagaaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 260 tatttcttcattttttaagttgaagatgaaataacatttattgatctaagtaaaaaaaaa 319
Query: 120 ttagtgataattcagatagttgttagggctggatacttatgtcaaaatccatatttttta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttagtgataattcagatagttgttagggctggatacttatgtcaaaatccatatttttta 379
Query: 180 ttttaaatttgtcagtcctgcctcaattttcttatccataaagtaatgtatatgatggtt 239
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttttaaaattgtcagtcctgcctcaattttcttatccataaagtaatgtatatgatggtt 439
Query: 240 tcctaaataaagttaacaatataaaagattacttaaaatagcttctcaaaatctggcatc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcctaaataaagttaacaatataaaagattacttaaaatagcttctcaaaatctggcatc 499
Query: 300 aaatactataaatagtacttaatagataattgtattggaaaacaaaaacaaaatatagta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 500 aaatactataaatagtacttaatagataattgtattggaaaacaaaaacaaaatacagta 559
Query: 360 atttaataaaggttttttttttaaattatgtcatttcaagaaacattttggggaatatga 419
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 560 atttaataaaggttttttttttaaattatgtcatttcaagaaacattttgtggaatatga 619
Query: 420 taacttttttttgaattttttgacatctaatagtacaatcaaatatttgagtagctgtta 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 taacttttttttgaattttttgacatctaatagtacaatcaaatatttgagtagctgtta 679
Query: 480 atgaaaagaacagccagcaagtatgacacagatatacagacatatgaacacacacatgca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 atgaaaagaacagccagcaagtatgacacagatatacagacatatgaacacacacatgca 739
Query: 540 aagtaggacacttttagaacgatttggtttaatattgtatagtttttctctgtttgacaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aagtaggacacttttagaacgatttggtttaatattgtatagtttttctctgtttgacaa 799
Query: 600 atggaaatctatgtactaatttagcctattatttattgcat 640
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 atggaaatctatgtactaatttagcctattatttattgcat 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
