CATXXXXXXXXXXXXXXXXXXXXXXXXCTANATCCCGAGGCGCGGCGGAA
TTCGGTATTTTTCCCAAAAAGGAATTCCTTACAACCCCATGGGACAAGGA
ATAGTTGAACATGCTCATCGCACCTTAAAGAATTGGCTCTTTAAGACAAA
AGAGGGGCAGCTATATCCCCCAAGGTCACCAAAGGCCCACCTTGCCTTCA
CCTTATTTATCCTAAATTTCTTGCACACCGATATCAAGGGCCAGTCTGCA
GCGTATCGCCACTGGCATCCAGTTACTTCTAATTCTTATGCATTGGTAAA
ATGGAAGGACCCCCTGATNAATGATTGGAAGGGTCCAGATCCAGTTCTAA
TTTGGGGTAGGGGCTCACCCCGCGTTTTTTCACGAGATGAAGATGGAGCG
CGGTGGCTGCCAGAGAGATTAATTCGTCAGATGAACACAGATTCTGACTC
TTCTGGTAAGTATCATTCTAAAGACTAAAATTCCTTTTGTGCTTAAAATT
CAGCTGAGAGCAACAGCTCTCAAAGCTGTTCTCCAGCTACTCTCTGAGCC
AGCTCCCGACAGGAGGCCGGAGACTAGCCTCAGCCTTACAATTTGCATTT
GAATAAAGTACCTAGACTTCCCCGAAAGAAGTTCTGCTTACCTACTTTCT
CACTGTTTTTTATTATTTTGCCCCTCAAGCAGGTAAATTAACATTCTCGA
GGTCGACTGTGTATGT

GATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAGATCATCTCCCAGGATTGGGAGATATTT
TGAGATAGTCACAAAACTGCTGTTTAAATATTTTTAAAAGCAAAGAATAG
CTTCCCTTGTCCAATAGAAAATTATGAATTTCAGTTTTTCTCTCTGGTGT
TGGGATATGATTTGAATTAGGCTAGCAGAAAGACCTTAGGAAGAAGGGGA
ATATTTTTGGATTTTTTTCAATGTATATTGAAGTGACATTAACTCTGCTA
TCTTTGACCCACAGGTTTCTGTTTTCATTTTAGTGATAAAAAGATCAATT
CAACCAAGTCTGATGCCATGGTTGAGTCAGACTGTACTTTGTGATGGTAC
TTTAACTATGGTAATTTTATTAGAGTATAAAACAGCCTGTCTTCAGTCTA
CAAGTGTTATTAACATATCATGAATTTTATTAGGACTTGGACAACTCTAC
TTGGGAATTGAGCATTAGACAAACTAGATCAAATGTTCTCTGTGGATTTG
AATGTGAAGTTATGCACTACCAGGGCTATTAAGTTCATGAGTACCTTTGG
GAAATCTGAGTTAGTTATAAATTAATAATATGAAGTAACATCAGCATGAC
ACAGATCTCCTGTCATTTGTTTAATGTGTTCTACACATTATCTCCTTCAG
TCCCTACATCTGTCC

Query= MSMg01no138_c17.g1 MSMg01no138_c17.g1 CHROMAT_FILE:
MSMg01no138_c17.g1 PHD_FILE: MSMg01no138_c17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:07 2005
         (569 letters)



>mm_chr6_108074805_108075773
          Length = 969

 Score = 1062 bits (549), Expect = 0.0
 Identities = 564/569 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agatcatctcccaggattgggagatattttgagatagtcacaaaactgctgtttaaatat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 agatcatctcccaggattgggagatattttgagatagtcacaaaactgctgtttaaatat 710

                                                                       
Query: 61  ttttaaaagcaaagaatagcttcccttgtccaatagaaaattatgaatttcagtttttct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 ttttaaaagcaaagaatagcttcccttgtccaatagaaaattatgaatttcagtttttct 650

                                                                       
Query: 121 ctctggtgttgggatatgatttgaattaggctagcagaaagaccttaggaagaaggggaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ctctggtgttgggatatgatttgaattaggctagcagaaagaccttaggaagaaggggaa 590

                                                                       
Query: 181 tatttttggatttttttcaatgtatattgaagtgacattaactctgctatctttgaccca 240
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 589 tatttttggatttttttcaatgtatattgaagtgacattaattctgctatctttgaccca 530

                                                                       
Query: 241 caggtttctgttttcattttagtgataaaaagatcaattcaaccaagtctgatgccatgg 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 529 caggtttctgttttcattttagtgataaaaagatcaattcaaccaagtctgatgccattg 470

                                                                       
Query: 301 ttgagtcagactgtactttgtgatggtactttaactatggtaattttattagagtataaa 360
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 469 ttgagtcagactgtactttgtgatggtactttagctatggtaattttattagagtataaa 410

                                                                       
Query: 361 acagcctgtcttcagtctacaagtgttattaacatatcatgaattttattaggacttgga 420
           |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 409 acagcctgtcttcagtctacaagtattattaacataccatgaattttattaggacttgga 350

                                                                       
Query: 421 caactctacttgggaattgagcattagacaaactagatcaaatgttctctgtggatttga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 caactctacttgggaattgagcattagacaaactagatcaaatgttctctgtggatttga 290

                                                                       
Query: 481 atgtgaagttatgcactaccagggctattaagttcatgagtacctttgggaaatctgagt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 atgtgaagttatgcactaccagggctattaagttcatgagtacctttgggaaatctgagt 230

                                        
Query: 541 tagttataaattaataatatgaagtaaca 569
           |||||||||||||||||||||||||||||
Sbjct: 229 tagttataaattaataatatgaagtaaca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space:   536081
Effective search space used:   536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)