XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCGAAATCCGCGGATTCC
TTTCACTATTCCCAATTTAGACTAATTTACTAGAGAGCCTGATGTCTCGG
GTTTTCTATCACTGTAAAGATATGCCATGACACTAGCAACCCTTATAAAG
GAAAATGCTTTCTTGGGGCTGGCTTACAGTTCAGGGGTTTGGTGTTATAA
AATATAATAAGGTGACGGGGTGCCTAGTGAGCCCATACCAAGGTGTGCTG
TACTGGCTGGTTTTGTGTGTCAACTTGACACAGGCTGGAGTTGTAACAGA
GAAAGGAACTTCAGTTGGGAAAGTGCCTCCATGAAGTCCAGCTGTGGGGC
ATTTTCTCAATTAGTGATCAAGGGGGAAGGGCCCCTTGTGAGTGGTGTCA
CCCCTAGCTCCACAAGAGAGCAGGCTGAGTAAGCCAGGGGGAGCAAACCA
GTAAGTAACATCCTTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGACCT
GCCTGAGTTCCAGTCCTGACATCCTTTGGTGATCAACAGCAATGTGGAAG
TATACGCCTTTCCTCCCCAACTTGTTTCTTGGTATGATGTTTGTGCAGGA
ATAGAAACCCTGACTAAGACATGTGCCCTTGAGTAATTACACTATGCAAC
AGATCTGGAATAAAGGGAGCTTATTGTCCAAAGACAGGAGTGAGGACCTG
AAAAGTTTATAA

TGAAGTGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXACTGAGGCAGAGGGTCACTCTAAATATAGGT
GTGGTGGCACCATTCCATGTCCAGGATTGCTGCACTGAATAAAAAGTAGA
CAGGAATAGGAAGCCCAGTGCTCAGCTCTCAGCTTCCTGGCTGCAGATAT
GGTATGGCCAGTGGCCTCAAACTCCCGCTGCCGTGTCTTCCCCACCATAG
TGAGCCGGAATAAAGTCATCTTTAAGTTGCTTCTGTCTGGTGTCTTGTCA
CATCAACAGAGAAAGAAACTAACACACTATCCAAGATAAAGTAGATGAGA
AAGTACATATGCAGAGACATTCTATCTAGAAACATGTTTACTTTTAACAA
AGAAAAATCAATGTTTTCAAATATTAAAAAAATTCTAGATATACAAAATG
AAGAAAACCTTTTGCATAAACATCTATACACAAATATTCACAGAAGCATT
ATTCATGATAACCAAAAGGGAATGATAATCTGAGTATCATCTGATAAACT
GTATAGAAAATGTGGTATATTCACATAGAGCTAGCTATGTTGCCTGACCA
TCACATGGTATAAAGTACTACAGCAAGGATGAACCTTGAAGACATCAAAC
TAAGAGAAGACGGCAAATACAAAAGGCCCAGATGTTACTCATTATGCCAC
TTACATAAACAGCACAGAGC

Query= MSMg01no139_b14.g1 MSMg01no139_b14.g1 CHROMAT_FILE:
MSMg01no139_b14.g1 PHD_FILE: MSMg01no139_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:22 2005
         (648 letters)



>mm_chr6_4899739_4900786
          Length = 1048

 Score = 1160 bits (600), Expect = 0.0
 Identities = 636/648 (98%), Gaps = 2/648 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   actgaggcagagggtcactctaaatataggtgtggtggcaccattccatgtccaggattg 60
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 819 actgaggcagagggtcactctaaatataggtgtggtggcaccgttccatgtccaggattg 760

                                                                       
Query: 61  ctgcactgaataaaaagtagacaggaataggaagcccagtgctcagctctcagcttcctg 120
           |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 759 ctgcactgaataaaaactagacaggaataggaagcccagtgctcagccctcagcttcctg 700

                                                                       
Query: 121 gctgcagatatggtatggccagtggcctcaaactcccgctgccgtgtcttccccaccata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 gctgcagatatggtatggccagtggcctcaaactcccgctgccgtgtcttccccaccata 640

                                                                       
Query: 181 gtgagccggaataaagtcatctttaagttgcttctgtctggtgtcttgtcacatcaacag 240
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gtgagtcggaataaagtcatctttaagttgcttctgtctggtgtcttgtcacatcaacag 580

                                                                       
Query: 241 agaaagaaactaacacactatccaagataaagtagatgagaaagtacatatgcagagaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 579 agaaagaaactaacacactatccaagataaagtagatgagaaagtacgtatgcagagaca 520

                                                                       
Query: 301 ttctatctagaaacatgtttacttttaacaaagaaaaatcaatgttttcaaatattaaaa 360
           ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 519 ttctatccagaaacatgtttacttttaacaaagaaaaatcaatgttttcaaacattaaaa 460

                                                                       
Query: 361 aaattctagatatacaaaatgaagaaaaccttttgcataaacatctatacacaaatattc 420
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aa-ttctagatatacaaaatgaagaaaaccttttgcataaacatctatacacaaatattc 401

                                                                       
Query: 421 acagaagcattattcatgataaccaaaagggaatgataatctgagtatcatctgataaac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 400 acagaagcattattcatgataaccaaaagggaatgataatctgagtatcatctgataaag 341

                                                                       
Query: 481 tgtatagaaaatgtggtatattcacatagagctagctatgttgcctgaccatcacatggt 540
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tgtatagaaaatgtagtatattcacatagagctagctatgttgcctgaccatcacatggt 281

                                                                       
Query: 541 ataaagtactacagcaaggatgaaccttgaagacatcaaactaagagaagacggcaaata 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 280 ataaagtactacagcaaggatgaaccttgaagacatcaaactaagagaagatggcaaata 221

                                                           
Query: 601 caaaaggcccagatgttactcattatgccacttacataaacagcacag 648
           |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 caaaag-cccagatgttactcattatgccacttacataaacagcacag 174


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space:   662244
Effective search space used:   662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)